RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 BDP1A6H8Y1 2624 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 MUC6Q6W4X9 2439 aa7.27□□□□□ -1.25
AP3S1-202ENST00000395548 PRAMEF22A3QJZ6 481 aa7.27□□□□□ -1.25
AP3S1-202ENST00000395548 CILPO75339 1184 aa7.27□□□□□ -1.25
AP3S1-202ENST00000395548 PF4P02776 101 aa7.27□□□□□ -1.25
AP3S1-202ENST00000395548 FOSL2P15408 326 aa7.27□□□□□ -1.25
AP3S1-202ENST00000395548 PLCG1P19174 1290 aa7.27□□□□□ -1.25
AP3S1-202ENST00000395548 RPS12P25398 132 aaKnown RBP7.27□□□□□ -1.25
AP3S1-202ENST00000395548 YARSP54577 528 aaKnown RBP7.27□□□□□ -1.25
AP3S1-202ENST00000395548 TAGLNQ01995 201 aaKnown RBP7.27□□□□□ -1.25
AP3S1-202ENST00000395548 TMEM31Q5JXX7 168 aa7.27□□□□□ -1.25
AP3S1-202ENST00000395548 PIWIL2Q8TC59 973 aaKnown RBP7.27□□□□□ -1.25
AP3S1-202ENST00000395548 ACSF2Q96CM8 615 aaPredicted RBP7.27□□□□□ -1.25
AP3S1-202ENST00000395548 CCDC120Q96HB5 630 aa7.27□□□□□ -1.25
AP3S1-202ENST00000395548 CARS2Q9HA77 564 aaKnown RBP7.27□□□□□ -1.25
AP3S1-202ENST00000395548 CEP131Q9UPN4 1083 aa7.27□□□□□ -1.25
AP3S1-202ENST00000395548 ST14Q9Y5Y6 855 aa7.27□□□□□ -1.25
AP3S1-202ENST00000395548 RBM47A0AV96 593 aaKnown RBP7.26□□□□□ -1.25
AP3S1-202ENST00000395548 FAM221AA4D161 298 aa7.26□□□□□ -1.25
AP3S1-202ENST00000395548 MAGEA10P43363 369 aaPredicted RBP7.26□□□□□ -1.25
AP3S1-202ENST00000395548 AFMP43652 599 aa7.26□□□□□ -1.25
AP3S1-202ENST00000395548 CRHR2Q13324 411 aa7.26□□□□□ -1.25
AP3S1-202ENST00000395548 KIF22Q14807 665 aa7.26□□□□□ -1.25
AP3S1-202ENST00000395548 PLEKHO1Q53GL0 409 aaPredicted RBP7.26□□□□□ -1.25
AP3S1-202ENST00000395548 UBE2FQ969M7 185 aa7.26□□□□□ -1.25
AP3S1-202ENST00000395548 SLC12A5Q9H2X9 1139 aa7.26□□□□□ -1.25
AP3S1-202ENST00000395548 IGSF5Q9NSI5 407 aa7.26□□□□□ -1.25
AP3S1-202ENST00000395548 FAM205AQ6ZU69 1335 aa7.26□□□□□ -1.25
AP3S1-202ENST00000395548 KDM3BQ7LBC6 1761 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 SHTN1A0MZ66 631 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 BTBD11A6QL63 1104 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 F6X3S4 739 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 F13A1P00488 732 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 TNK2Q07912 1038 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 AMOTQ4VCS5 1084 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 C1orf141Q5JVX7 400 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 TMEM201Q5SNT2 666 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 CLEC4GQ6UXB4 293 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 ARMC9Q7Z3E5 817 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 FAM13CQ8NE31 585 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 MYLIPQ8WY64 445 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 RPGRQ92834 1020 aaKnown RBP7.25□□□□□ -1.25
AP3S1-202ENST00000395548 RHOVQ96L33 236 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 ASB2Q96Q27 587 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 ZSWIM5Q9P217 1185 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 CTNND2Q9UQB3 1225 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 ZNF652Q9Y2D9 606 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 CORINQ9Y5Q5 1042 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.25□□□□□ -1.25
AP3S1-202ENST00000395548 CACNA1GO43497 2377 aa7.25□□□□□ -1.25
AP3S1-202ENST00000395548 ZBTB48P10074 688 aaPredicted RBP7.24□□□□□ -1.25
AP3S1-202ENST00000395548 UBXN2AP68543 259 aa7.24□□□□□ -1.25
AP3S1-202ENST00000395548 KIAA2012Q0VF49 1180 aa7.24□□□□□ -1.25
AP3S1-202ENST00000395548 SNAP47Q5SQN1 464 aa7.24□□□□□ -1.25
AP3S1-202ENST00000395548 ZNF530Q6P9A1 599 aaPredicted RBP7.24□□□□□ -1.25
AP3S1-202ENST00000395548 MOB2Q70IA6 237 aa7.24□□□□□ -1.25
AP3S1-202ENST00000395548 ZSWIM9Q86XI8 627 aa7.24□□□□□ -1.25
AP3S1-202ENST00000395548 C7orf61Q8IZ16 206 aa7.24□□□□□ -1.25
AP3S1-202ENST00000395548 DNAJB8Q8NHS0 232 aa7.24□□□□□ -1.25
AP3S1-202ENST00000395548 CYB5D2Q8WUJ1 264 aa7.24□□□□□ -1.25
AP3S1-202ENST00000395548 FAM53CQ9NYF3 392 aa7.24□□□□□ -1.25
AP3S1-202ENST00000395548 ZMYND8Q9ULU4 1186 aaPredicted RBP7.24□□□□□ -1.25
AP3S1-202ENST00000395548 NCOR1O75376 2440 aa7.24□□□□□ -1.25
AP3S1-202ENST00000395548 MINDY4BA8MYZ0 360 aa7.23□□□□□ -1.25
AP3S1-202ENST00000395548 PPM1GO15355 546 aaPredicted RBP7.23□□□□□ -1.25
AP3S1-202ENST00000395548 WDHD1O75717 1129 aaPredicted RBP7.23□□□□□ -1.25
AP3S1-202ENST00000395548 CAMTA2O94983 1202 aa7.23□□□□□ -1.25
AP3S1-202ENST00000395548 CCL5P13501 91 aa7.23□□□□□ -1.25
AP3S1-202ENST00000395548 IL6STP40189 918 aaPredicted RBP7.23□□□□□ -1.25
AP3S1-202ENST00000395548 MRPS5P82675 430 aaKnown RBP7.23□□□□□ -1.25
AP3S1-202ENST00000395548 MPP2Q14168 576 aa7.23□□□□□ -1.25
AP3S1-202ENST00000395548 KCNMB1Q16558 191 aa7.23□□□□□ -1.25
AP3S1-202ENST00000395548 CRY2Q49AN0 593 aa7.23□□□□□ -1.25
AP3S1-202ENST00000395548 TMPRSS7Q7RTY8 843 aa7.23□□□□□ -1.25
AP3S1-202ENST00000395548 NECAB2Q7Z6G3 386 aa7.23□□□□□ -1.25
AP3S1-202ENST00000395548 GOLM1Q8NBJ4 401 aa7.23□□□□□ -1.25
AP3S1-202ENST00000395548 U2AF1L4Q8WU68 220 aaKnown RBP7.23□□□□□ -1.25
AP3S1-202ENST00000395548 RTFDC1Q9BY42 306 aaPredicted RBP7.23□□□□□ -1.25
AP3S1-202ENST00000395548 TRIT1Q9H3H1 467 aaKnown RBP7.23□□□□□ -1.25
AP3S1-202ENST00000395548 KCNH3Q9ULD8 1083 aa7.23□□□□□ -1.25
AP3S1-202ENST00000395548 POLR2AP24928 1970 aaKnown RBP7.22□□□□□ -1.25
AP3S1-202ENST00000395548 ZNF646O15015 1829 aaPredicted RBP7.22□□□□□ -1.25
AP3S1-202ENST00000395548 UPK3BL1B0FP48 263 aa7.22□□□□□ -1.25
AP3S1-202ENST00000395548 UPK3BL2E5RIL1 263 aa7.22□□□□□ -1.25
AP3S1-202ENST00000395548 SGPL1O95470 568 aa7.22□□□□□ -1.25
AP3S1-202ENST00000395548 GDNFP39905 211 aa7.22□□□□□ -1.25
AP3S1-202ENST00000395548 FAM160A1Q05DH4 1040 aa7.22□□□□□ -1.25
AP3S1-202ENST00000395548 SLFN12Q8IYM2 578 aa7.22□□□□□ -1.25
AP3S1-202ENST00000395548 RBM17Q96I25 401 aaKnown RBP7.22□□□□□ -1.25
AP3S1-202ENST00000395548 CRAMP1Q96RY5 1269 aa7.22□□□□□ -1.25
AP3S1-202ENST00000395548 TEX13AQ9BXU3 409 aaPredicted RBP7.22□□□□□ -1.25
AP3S1-202ENST00000395548 THEGQ9P2T0 379 aa7.22□□□□□ -1.25
AP3S1-202ENST00000395548 REV1Q9UBZ9 1251 aa7.22□□□□□ -1.25
AP3S1-202ENST00000395548 SCN7AQ01118 1682 aa7.22□□□□□ -1.25
AP3S1-202ENST00000395548 PSMD14O00487 310 aa7.21□□□□□ -1.26
AP3S1-202ENST00000395548 TFRCP02786 760 aaKnown RBP7.21□□□□□ -1.26
AP3S1-202ENST00000395548 C8AP07357 584 aa7.21□□□□□ -1.26
AP3S1-202ENST00000395548 HOXD10P28358 340 aa7.21□□□□□ -1.26
AP3S1-202ENST00000395548 CAP1Q01518 475 aa7.21□□□□□ -1.26
AP3S1-202ENST00000395548 DPP8Q6V1X1 898 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms