RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TCHPQ9BT92 498 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 HERC5Q9UII4 1024 aaKnown RBP17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 A0A1B0GTH6 734 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 ERICH4A6NGS2 130 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 ENTPD3O75355 529 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 SEPT14Q6ZU15 432 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 DHTKD1Q96HY7 919 aaPredicted RBP17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 RMDN3Q96TC7 470 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 RPAP3Q9H6T3 665 aaPredicted RBP17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 ABHD10Q9NUJ1 306 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 TERF1P54274 439 aa17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 UNC13DQ70J99 1090 aa17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 NCAPG2Q86XI2 1143 aa17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 PNMA5Q96PV4 448 aa17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 GLT8D2Q9H1C3 349 aa17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 RNF225M0QZC1 329 aaPredicted RBP17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 FOSP01100 380 aaPredicted RBP17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 PLEKP08567 350 aaPredicted RBP17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 ARP10275 920 aa17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 EIF2AK1Q9BQI3 630 aaKnown RBP17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 VCPKMTQ9H867 229 aa17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 HDAC6Q9UBN7 1215 aa17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 IPO5O00410 1097 aaKnown RBP17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 ELMO3Q96BJ8 720 aa17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 PPP1R16BQ96T49 567 aa17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 STK17AQ9UEE5 414 aa17.56■□□□□ 0.4
SMARCD1-202ENST00000394963 MSH4O15457 936 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 SEC31AO94979 1220 aaKnown RBP17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 GCFC2P16383 781 aaKnown RBP17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 KIAA1755Q5JYT7 1200 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 KIAA0895Q8NCT3 520 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 HAS1Q92839 578 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 MMTAG2Q9BU76 263 aaKnown RBP17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 KBTBD4Q9NVX7 518 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 ARMCX3Q9UH62 379 aaPredicted RBP17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 K7ENM7 598 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 KRT86O43790 486 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 ABL1P00519 1130 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 CAP2P40123 477 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 MAGEA1P43355 309 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 FKBP3Q00688 224 aaKnown RBP17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 SNRNP48Q6IEG0 339 aaKnown RBP17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 LRRC15Q8TF66 581 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 ATG4CQ96DT6 458 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 BLOC1S4Q9NUP1 217 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 KDM3AQ9Y4C1 1321 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 MYH7P12883 1935 aa17.55■□□□□ 0.4
SMARCD1-202ENST00000394963 TMEM110-MUSTN1A8MSY1 372 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 LRRN2O75325 713 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 FAM133AQ8N9E0 248 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 GIMAP8Q8ND71 665 aaPredicted RBP17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 CCDC102AQ96A19 550 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 IDI2Q9BXS1 227 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 IFIH1Q9BYX4 1025 aaKnown RBP17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 SNED1Q8TER0 1413 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 PNMA6AP0CW24 399 aaPredicted RBP17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 MYBP10242 640 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 ZNF18P17022 549 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 ABCB4P21439 1286 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 REEP2Q9BRK0 252 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 FGFBP2Q9BYJ0 223 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 GOLGA6L9A6NEM1 432 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 NKRFO15226 690 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 RHOBTB3O94955 611 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 PRPHP41219 470 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 SSR1P43307 286 aaKnown RBP17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 TEKT3Q9BXF9 490 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 WDR11Q9BZH6 1224 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 CENPHQ9H3R5 247 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 SEMA6BQ9H3T3 888 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 C4BP0C0L5 1744 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 IRS2Q9Y4H2 1338 aa17.54■□□□□ 0.4
SMARCD1-202ENST00000394963 DDNO94850 711 aaPredicted RBP17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 ACTN1P12814 892 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 NCBP1Q09161 790 aaKnown RBP17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 KCNA1Q09470 495 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 GRIPAP1Q4V328 841 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 NLRX1Q86UT6 975 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 SULF1Q8IWU6 871 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 TRERF1Q96PN7 1200 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 CEP89Q96ST8 783 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 GTPBP4Q9BZE4 634 aaKnown RBP17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 RNF181Q9P0P0 153 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 EML1O00423 815 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 MEIS2O14770 477 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 XRCC5P13010 732 aaKnown RBP17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 DAGLBQ8NCG7 672 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 NLGN2Q8NFZ4 835 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 USP20Q9Y2K6 914 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 DUSP10Q9Y6W6 482 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 LGALS16A8MUM7 142 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 hCG_1984214I3L0E3 225 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 EPB41P11171 864 aaKnown RBP17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 KLHL30Q0D2K2 578 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 BAATQ14032 418 aaPredicted RBP17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 GPR162Q16538 588 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 SH3RF1Q7Z6J0 888 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 ZNF713Q8N859 430 aaPredicted RBP17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 PRPF38AQ8NAV1 312 aaKnown RBP17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 OTUD5Q96G74 571 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms