RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 IMPG1Q17R60 797 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 MTERF2Q49AM1 385 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 DCPSQ96C86 337 aaKnown RBP13.22□□□□□ -0.29
SIN3A-202ENST00000394947 LLPHQ9BRT6 129 aaKnown RBP13.22□□□□□ -0.29
SIN3A-202ENST00000394947 OR52Z1P0C646 297 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 PTH1RQ03431 593 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 ADALQ6DHV7 355 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.22□□□□□ -0.29
SIN3A-202ENST00000394947 PLBD2Q8NHP8 589 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 YIPF3Q9GZM5 350 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 KMT5AQ9NQR1 393 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 MFAP3P55082 362 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 PTGDRQ13258 359 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
SIN3A-202ENST00000394947 KLRF2D3W0D1 207 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 H0YC42 278 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 ATXN3P54252 364 aaPredicted RBP13.22□□□□□ -0.29
SIN3A-202ENST00000394947 PKP1Q13835 747 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 LMBRD1Q9NUN5 540 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 DRP2Q13474 957 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 EDEM3Q9BZQ6 932 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 AS3MTQ9HBK9 375 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 KIAA1468Q9P260 1216 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 SH3TC1Q8TE82 1336 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 CREB3O43889 395 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 HSPA4LO95757 839 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 H2AFZP0C0S5 128 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 BTDP43251 543 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 H2AFVQ71UI9 128 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 BBS5Q8N3I7 341 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 LPIN2Q92539 896 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 ANKRD36BQ8N2N9 1353 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 EXOC1LA0A1B0GW35 172 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 TEKT4Q8WW24 435 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 SLC5A4Q9NY91 659 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 PRKAG2Q9UGJ0 569 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 MAST3O60307 1309 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 MAN1A2O60476 641 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 CCDC159P0C7I6 412 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 SLFN14P0C7P3 912 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 POLR2BP30876 1174 aaKnown RBP13.21□□□□□ -0.29
SIN3A-202ENST00000394947 GSPT2Q8IYD1 628 aaKnown RBP13.21□□□□□ -0.29
SIN3A-202ENST00000394947 ING2Q9H160 280 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 YY1AP1Q9H869 796 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 ZBTB40Q9NUA8 1239 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 CDV3Q9UKY7 258 aaKnown RBP13.21□□□□□ -0.29
SIN3A-202ENST00000394947 PACSIN2Q9UNF0 486 aaPredicted RBP13.21□□□□□ -0.29
SIN3A-202ENST00000394947 ZNF711Q9Y462 761 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 SPAG7O75391 227 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 DHX9Q08211 1270 aaKnown RBP13.21□□□□□ -0.29
SIN3A-202ENST00000394947 MIGA2Q7L4E1 593 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 TEX2Q8IWB9 1127 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 FAF2Q96CS3 445 aa13.21□□□□□ -0.29
SIN3A-202ENST00000394947 EPN1Q9Y6I3 576 aaPredicted RBP13.21□□□□□ -0.29
SIN3A-202ENST00000394947 BTBD18B2RXH4 712 aa13.21□□□□□ -0.3
SIN3A-202ENST00000394947 POU5F1BQ06416 359 aa13.21□□□□□ -0.3
SIN3A-202ENST00000394947 TJAP1Q5JTD0 557 aa13.21□□□□□ -0.3
SIN3A-202ENST00000394947 NRBF2Q96F24 287 aa13.21□□□□□ -0.3
SIN3A-202ENST00000394947 ATP2B4P23634 1241 aa13.21□□□□□ -0.3
SIN3A-202ENST00000394947 COPB1P53618 953 aaKnown RBP13.21□□□□□ -0.3
SIN3A-202ENST00000394947 ZNF790Q6PG37 636 aa13.21□□□□□ -0.3
SIN3A-202ENST00000394947 NEK8Q86SG6 692 aa13.21□□□□□ -0.3
SIN3A-202ENST00000394947 NBNO60934 754 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 SERPIND1P05546 499 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 TBL3Q12788 808 aaKnown RBP13.2□□□□□ -0.3
SIN3A-202ENST00000394947 SLFN12Q8IYM2 578 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 CHURC1Q8WUH1 139 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 NLRP4Q96MN2 994 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 ELAC2Q9BQ52 826 aaKnown RBP13.2□□□□□ -0.3
SIN3A-202ENST00000394947 EFHD1Q9BUP0 239 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 POLD4Q9HCU8 107 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 L3MBTL1Q9Y468 752 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 PJA2O43164 708 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 ECEL1O95672 775 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 NR2F2P24468 414 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 ARL4AP40617 200 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 MAP7D3Q8IWC1 876 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 DCAF5Q96JK2 942 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 CYP4F11Q9HBI6 524 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 LRRC4Q9HBW1 653 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 DDX28Q9NUL7 540 aaKnown RBP13.2□□□□□ -0.3
SIN3A-202ENST00000394947 IBTKQ9P2D0 1353 aaPredicted RBP13.2□□□□□ -0.3
SIN3A-202ENST00000394947 ZSCAN20P17040 1043 aaPredicted RBP13.2□□□□□ -0.3
SIN3A-202ENST00000394947 HOXC9P31274 260 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 RANBP1P43487 201 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 CACNB2Q08289 660 aaPredicted RBP13.2□□□□□ -0.3
SIN3A-202ENST00000394947 ACCSLQ4AC99 568 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 PPP6R3Q5H9R7 873 aaPredicted RBP13.2□□□□□ -0.3
SIN3A-202ENST00000394947 FAM160B1Q5W0V3 765 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 PNMA1Q8ND90 353 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 NT5C1BQ96P26 610 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 SLC12A6Q9UHW9 1150 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 USP19O94966 1318 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 PIK3R2O00459 728 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 ANXA13P27216 316 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 ICA1Q05084 483 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 NNTQ13423 1086 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 C1orf228Q6PIY5 440 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 CASS4Q9NQ75 786 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 ATP8A2Q9NTI2 1148 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms