RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 JAG2Q9Y219 1238 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 FBXO31Q5XUX0 539 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-205ENST00000394768 CFAP36Q96G28 342 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 ZNF577Q9BSK1 485 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 BIVM-ERCC5R4GMW8 1640 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 MYO3BQ8WXR4 1341 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 FAM149B1Q96BN6 582 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 SLC4A7Q9Y6M7 1214 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 GTPBP6O43824 516 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-205ENST00000394768 CREB3O43889 395 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 PRKG1Q13976 671 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 FLOT2Q14254 428 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 HOMEZQ8IX15 550 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 GOLGA8RI6L899 631 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 HSPA1AP0DMV8 641 aaKnown RBP8.01□□□□□ -1.13
SYNE2-205ENST00000394768 HSPA1BP0DMV9 641 aaKnown RBP8.01□□□□□ -1.13
SYNE2-205ENST00000394768 FSCBQ5H9T9 825 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 SPOPLQ6IQ16 392 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 YAF2Q8IY57 180 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 ANKRD42Q8N9B4 389 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 KIAA1586Q9HCI6 787 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 SYCE1LA8MT33 242 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 SERPINB10P48595 397 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 JAK3P52333 1124 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 DEPDC1BQ8WUY9 529 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 ECT2Q9H8V3 914 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 RPF1Q9H9Y2 349 aaKnown RBP8.01□□□□□ -1.13
SYNE2-205ENST00000394768 BAIAP2L1Q9UHR4 511 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 ASXL2Q76L83 1435 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 ZMYM6O95789 1325 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 PSMA4P25789 261 aaKnown RBP8.01□□□□□ -1.13
SYNE2-205ENST00000394768 HDAC4P56524 1084 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 DCLK2Q8N568 766 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 KANSL2Q9H9L4 492 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 KCNH4Q9UQ05 1017 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 KRT37O76014 449 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 SCG2P13521 617 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 CWF19L2Q2TBE0 894 aaKnown RBP8.01□□□□□ -1.13
SYNE2-205ENST00000394768 SCYL3Q8IZE3 742 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 GCOM2Q9BZD3 368 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-205ENST00000394768 MAP3K20Q9NYL2 800 aaKnown RBP8.01□□□□□ -1.13
SYNE2-205ENST00000394768 SHANK2Q9UPX8 1470 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 MAPK4P31152 587 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 CEBPAP49715 358 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-205ENST00000394768 TOGARAM2Q6ZUX3 1019 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 KMT5AQ9NQR1 393 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 DIS3Q9Y2L1 958 aaKnown RBP8.01□□□□□ -1.13
SYNE2-205ENST00000394768 SKIP12755 728 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 CDC42EP1Q00587 391 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 ZC3H12BQ5HYM0 836 aaKnown RBP8.01□□□□□ -1.13
SYNE2-205ENST00000394768 PDIK1LQ8N165 341 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 JARID2Q92833 1246 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-205ENST00000394768 PIDD1Q9HB75 910 aa8.01□□□□□ -1.13
SYNE2-205ENST00000394768 MAP2K2P36507 400 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 HSPA2P54652 639 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 PTGDRQ13258 359 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 PHKG1Q16816 387 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 POLKQ9UBT6 870 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 COL17A1Q9UMD9 1497 aaPredicted RBP8□□□□□ -1.13
SYNE2-205ENST00000394768 NPM3O75607 178 aaKnown RBP8□□□□□ -1.13
SYNE2-205ENST00000394768 ECEL1O95672 775 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 RASIP1Q5U651 963 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 FAM196AQ6ZSG2 479 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 NELFCDQ8IXH7 590 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 ZNF654Q8IZM8 581 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 RABGGTAQ92696 567 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 MRFAP1L1Q96HT8 127 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 TMCO4Q5TGY1 634 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 TTC19Q6DKK2 380 aaPredicted RBP8□□□□□ -1.13
SYNE2-205ENST00000394768 C2orf69Q8N8R5 385 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 PNMA1Q8ND90 353 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 UBE2Q2Q8WVN8 375 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 KLRF2D3W0D1 207 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 ANXA1P04083 346 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 MORF4L2Q15014 288 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 MYSM1Q5VVJ2 828 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 FAM160B2Q86V87 743 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 PHKBQ93100 1093 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 KPNA7A9QM74 516 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 LRMPQ12912 555 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 NR5A1Q13285 461 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 SLC10A5Q5PT55 438 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 TTC13Q8NBP0 860 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 NCLNQ969V3 563 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 DHTKD1Q96HY7 919 aaPredicted RBP8□□□□□ -1.13
SYNE2-205ENST00000394768 TAB2Q9NYJ8 693 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 L3MBTL1Q9Y468 752 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 PFDN1O60925 122 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 TJP3O95049 919 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 PSMD2Q13200 908 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 RRM2BQ7LG56 351 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 RTKN2Q8IZC4 609 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 LRRC43Q8N309 656 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 TTC8Q8TAM2 541 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 PBKQ96KB5 322 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 CAPS2Q9BXY5 557 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 TM6SF1Q9BZW5 370 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 TRPC5Q9UL62 973 aaPredicted RBP8□□□□□ -1.13
SYNE2-205ENST00000394768 ZNF197O14709 1029 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 HOXC9P31274 260 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms