RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 ECHS1P30084 290 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 OXCT1P55809 520 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 TRIM14Q14142 442 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 EIF4A2Q14240 407 aaKnown RBP13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 CERKLQ49MI3 558 aaPredicted RBP13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 TRIML1Q8N9V2 468 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 WDR66Q8TBY9 1149 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 RMDN2Q96LZ7 410 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 NR1H4Q96RI1 486 aaPredicted RBP13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 CDK19Q9BWU1 502 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 SPATA16Q9BXB7 569 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 PCDH18Q9HCL0 1135 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 RMND1Q9NWS8 449 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 LIMA1Q9UHB6 759 aaKnown RBP13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 JCADQ9P266 1359 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 N4BP2Q86UW6 1770 aaPredicted RBP13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 TMEM110-MUSTN1A8MSY1 372 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 ADAMTS2O95450 1211 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 GALK1P51570 392 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 ZNF131P52739 623 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 GALNTL6Q49A17 601 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 MCMDC2Q4G0Z9 681 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 ASRGL1Q7L266 308 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 AZIN2Q96A70 460 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 EPSTI1Q96J88 318 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 CCDC42Q96M95 316 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 SH2D4AQ9H788 454 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 PFDN4Q9NQP4 134 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 DDX21Q9NR30 783 aaKnown RBP eCLIP13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 GMEB1Q9Y692 573 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 MYH7BA7E2Y1 1941 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 MROH2AA6NES4 1674 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 MAP3K19Q56UN5 1328 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 TJP3O95049 919 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 IFI35P80217 286 aaPredicted RBP13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 MECOMQ03112 1051 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 AGBL2Q5U5Z8 902 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 KSR1Q8IVT5 923 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 SCUBE1Q8IWY4 988 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 NMD3Q96D46 503 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 AGXT2Q9BYV1 514 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 TRIM31Q9BZY9 425 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 KRT23Q9C075 422 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 RFX7Q2KHR2 1363 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 ITGA2BP08514 1039 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 GSTA2P09210 222 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 MTHFSDQ2M296 383 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 SLC44A4Q53GD3 710 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 MB21D1Q8N884 522 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 GBP7Q8N8V2 638 aaPredicted RBP13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 ZNF333Q96JL9 665 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 ANKRD27Q96NW4 1050 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 SIKE1Q9BRV8 207 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 CSRNP2Q9H175 543 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 ATP8A2Q9NTI2 1148 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 SH3GLB1Q9Y371 365 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 HEY1Q9Y5J3 304 aa13.65□□□□□ -0.22
SLC28A1-203ENST00000394573 ABCA8O94911 1581 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 NUTM2BA6NNL0 878 aaPredicted RBP13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 NUTM2EB1AL46 878 aaPredicted RBP13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 LDHAP00338 332 aaKnown RBP13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 HOXD11P31277 338 aaPredicted RBP13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 RTP1P59025 263 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 LSAMPQ13449 338 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 CCDC6Q16204 474 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 TMEM53Q6P2H8 277 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 RBBP8NLQ8NC74 664 aaPredicted RBP13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 FAM13CQ8NE31 585 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 MTMR8Q96EF0 704 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 TRAIPQ9BWF2 469 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 ANGEL1Q9UNK9 670 aaKnown RBP13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 ATP8A1Q9Y2Q0 1164 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 USP15Q9Y4E8 981 aaPredicted RBP13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 PCDHA13Q9Y5I0 950 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 ANKARQ7Z5J8 1434 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 WDR17Q8IZU2 1322 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 ARHGEF10O15013 1369 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 BAG3O95817 575 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 CCDC166P0CW27 439 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 VCAM1P19320 739 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 RASA1P20936 1047 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 SERPINB3P29508 390 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 SLCO1A2P46721 670 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 ERFP50548 548 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 SMUG1Q53HV7 270 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 GIGYF2Q6Y7W6 1299 aaKnown RBP13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 MAP7D3Q8IWC1 876 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 SCG3Q8WXD2 468 aaKnown RBP13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 ABHD8Q96I13 439 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 AGAP3Q96P47 875 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 PHF12Q96QT6 1004 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 FBXO2Q9UK22 296 aaPredicted RBP13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 EFR3BQ9Y2G0 817 aa13.64□□□□□ -0.23
SLC28A1-203ENST00000394573 DYTNA2CJ06 578 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 TCP11X1B4DZS4 312 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 DAPK3O43293 454 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 NFKBIAP25963 317 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms