RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 GNAQP50148 359 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 NDUFA8P51970 172 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 SLC39A14Q15043 492 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 ABCB5Q2M3G0 1257 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 TBC1D10BQ4KMP7 808 aaPredicted RBP6.67□□□□□ -1.34
CASC3-202ENST00000394114 PIK3AP1Q6ZUJ8 805 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 ARHGAP27Q6ZUM4 889 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 LAPTM4BQ86VI4 370 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 AGBL3Q8NEM8 1001 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 NUP88Q99567 741 aaPredicted RBP6.67□□□□□ -1.34
CASC3-202ENST00000394114 METRNQ9UJH8 293 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 CEP350Q5VT06 3117 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 CPNE3O75131 537 aaKnown RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 INHAP05111 366 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 NT5C2P49902 561 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 SETQ01105 290 aaPredicted RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 ICA1Q05084 483 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 GRIN1Q05586 938 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 PTPAQ15257 358 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 MAP3K11Q16584 847 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 C4orf48Q5BLP8 95 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 AXDND1Q5T1B0 1012 aaPredicted RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 ADALQ6DHV7 355 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 CCDC84Q86UT8 332 aaPredicted RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 BPHLQ86WA6 291 aaPredicted RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 FOXP4Q8IVH2 680 aaPredicted RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 RAVER1Q8IY67 606 aaKnown RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 MRPS27Q92552 414 aaKnown RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.66□□□□□ -1.34
CASC3-202ENST00000394114 BRMS1Q9HCU9 246 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 GINM1Q9NU53 330 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 PRKAG3Q9UGI9 489 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 ADAMTS1Q9UHI8 967 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 TCEAL9Q9UHQ7 104 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 GREB1LQ9C091 1923 aaPredicted RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 ZNF541Q9H0D2 1346 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 MYO1BO43795 1136 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 KINO60870 393 aaKnown RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 STAU1O95793 577 aaKnown RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 GNALP38405 381 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 NAPAP54920 295 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 SNW1Q13573 536 aaKnown RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 TNIP1Q15025 636 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 ZNF174Q15697 407 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 RILPL1Q5EBL4 403 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 ZFYVE27Q5T4F4 411 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 KRT26Q7Z3Y9 468 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 SPICE1Q8N0Z3 855 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 FAM160A2Q8N612 972 aaPredicted RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 RRP36Q96EU6 259 aaKnown RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 CCDC17Q96LX7 622 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 VPS33BQ9H267 617 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 CLSTN2Q9H4D0 955 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 SPON1Q9HCB6 807 aa6.66□□□□□ -1.34
CASC3-202ENST00000394114 DDX19AQ9NUU7 478 aaKnown RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 SEC63Q9UGP8 760 aaKnown RBP6.66□□□□□ -1.34
CASC3-202ENST00000394114 ATRNL1Q5VV63 1379 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 CENPFP49454 3210 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 CCDC85CA6NKD9 419 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 STXBP3O00186 592 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 USP17L7P0C7H9 530 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 NOVP48745 357 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 SNAP25P60880 206 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 FAM160A1Q05DH4 1040 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 PTCRAQ6ISU1 281 aaPredicted RBP6.65□□□□□ -1.34
CASC3-202ENST00000394114 TATDN1Q6P1N9 297 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 C11orf96Q7Z7L8 435 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 SIAH1Q8IUQ4 282 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 FAM151AQ8WW52 585 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 COA7Q96BR5 231 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 SLC39A13Q96H72 371 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 SPZ1Q9BXG8 430 aa6.65□□□□□ -1.34
CASC3-202ENST00000394114 SCHIP1Q9P0W5 487 aaPredicted RBP6.65□□□□□ -1.34
CASC3-202ENST00000394114 TRIM75PA6NK02 468 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 PFKFB1P16118 471 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 MCM7P33993 719 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 NOS2P35228 1153 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 ECE1P42892 770 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 SLC1A4P43007 532 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 ZNF543Q08ER8 600 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 IKQ13123 557 aaPredicted RBP6.65□□□□□ -1.35
CASC3-202ENST00000394114 SQSTM1Q13501 440 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 ZYXQ15942 572 aaKnown RBP6.65□□□□□ -1.35
CASC3-202ENST00000394114 SLFN13Q68D06 897 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 SHC4Q6S5L8 630 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 TMEM179Q6ZVK1 233 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 BLIDQ8IZY5 108 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 ENGASEQ8NFI3 743 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 SDF4Q9BRK5 362 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 NOC4LQ9BVI4 516 aaKnown RBP6.65□□□□□ -1.35
CASC3-202ENST00000394114 BARHL2Q9NY43 387 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 CNOT7Q9UIV1 285 aaKnown RBP6.65□□□□□ -1.35
CASC3-202ENST00000394114 SMCHD1A6NHR9 2005 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 ARFGEF1Q9Y6D6 1849 aa6.65□□□□□ -1.35
CASC3-202ENST00000394114 A0A1W2PRG0 241 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 F5H6K3 240 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 TAL1P17542 331 aaPredicted RBP6.64□□□□□ -1.35
CASC3-202ENST00000394114 CDKN1CP49918 316 aaPredicted RBP6.64□□□□□ -1.35
CASC3-202ENST00000394114 KLRC3Q07444 240 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 TKFCQ3LXA3 575 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms