RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 CWC15Q9P013 229 aaKnown RBP20.72■□□□□ 0.91
SMARCC2-203ENST00000394023 TUBB4BP68371 445 aa20.72■□□□□ 0.91
SMARCC2-203ENST00000394023 GFPT1Q06210 699 aaPredicted RBP20.72■□□□□ 0.91
SMARCC2-203ENST00000394023 PRKG1Q13976 671 aa20.72■□□□□ 0.91
SMARCC2-203ENST00000394023 DCAF4Q8WV16 495 aa20.72■□□□□ 0.91
SMARCC2-203ENST00000394023 SEMA6BQ9H3T3 888 aa20.72■□□□□ 0.91
SMARCC2-203ENST00000394023 MORC2Q9Y6X9 1032 aaPredicted RBP20.72■□□□□ 0.91
SMARCC2-203ENST00000394023 FAM163AQ96GL9 167 aaPredicted RBP20.72■□□□□ 0.91
SMARCC2-203ENST00000394023 PODXL2Q9NZ53 605 aa20.72■□□□□ 0.91
SMARCC2-203ENST00000394023 DMTNQ08495 405 aa20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 KCNK18Q7Z418 384 aa20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 NIM1KQ8IY84 436 aa20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 CCDC170Q8IYT3 715 aa20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 CCDC151A5D8V7 595 aa20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 CRY2Q49AN0 593 aa20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 APOBEC3HQ6NTF7 200 aaKnown RBP20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 KLHL7Q8IXQ5 586 aa20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 FAM178BQ8IXR5 827 aa20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 KIAA0895Q8NCT3 520 aa20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 GLIS3Q8NEA6 775 aa20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 ESYT2A0FGR8 921 aa20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 HOXA10P31260 410 aaPredicted RBP20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 PSMD2Q13200 908 aa20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 STRIP1Q5VSL9 837 aa20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 C8orf74Q6P047 294 aa20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 MYO5AQ9Y4I1 1855 aaKnown RBP20.71■□□□□ 0.91
SMARCC2-203ENST00000394023 TMEM110-MUSTN1A8MSY1 372 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 ZNF185O15231 689 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 GNA14O95837 355 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 EHHADHQ08426 723 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 SND1Q7KZF4 910 aaKnown RBP eCLIP20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 DUSP9Q99956 384 aaKnown RBP20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 FTCDO95954 541 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 VAV2P52735 878 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 EXOC3L4Q17RC7 722 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 CERKQ8TCT0 537 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 SH2D4AQ9H788 454 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 ODR4Q5SWX8 454 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 PRMT6Q96LA8 375 aaPredicted RBP20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 RABEP2Q9H5N1 569 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 BCCIPQ9P287 314 aaKnown RBP eCLIP20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 CCPG1Q9ULG6 757 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 CCDC169A6NNP5 214 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 KLRC4O43908 158 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 TMEM132AQ24JP5 1023 aa20.7■□□□□ 0.9
SMARCC2-203ENST00000394023 TAF1P21675 1872 aa20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 ABCB4P21439 1286 aa20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 ODF2Q5BJF6 829 aa20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 ZNF577Q9BSK1 485 aa20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 GOLGA6L10A6NI86 522 aa20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 SMARCA1P28370 1054 aa20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 FXR2P51116 673 aaKnown RBP eCLIP20.69■□□□□ 0.95e-7■■■■■ 28.4
SMARCC2-203ENST00000394023 PPP1R18Q6NYC8 613 aa20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 PNMA5Q96PV4 448 aa20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 SUGCTQ9HAC7 445 aa20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 GAKO14976 1311 aa20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 MYH14Q7Z406 1995 aaKnown RBP20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 MAATS1Q7Z4T9 603 aa20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 GSPT2Q8IYD1 628 aaKnown RBP20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 BICD1Q96G01 975 aa20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 LACRTQ9GZZ8 138 aa20.69■□□□□ 0.9
SMARCC2-203ENST00000394023 NCK2O43639 380 aa20.68■□□□□ 0.9
SMARCC2-203ENST00000394023 CEP104O60308 925 aa20.68■□□□□ 0.9
SMARCC2-203ENST00000394023 SLC7A5Q01650 507 aa20.68■□□□□ 0.9
SMARCC2-203ENST00000394023 NOA1Q8NC60 698 aaKnown RBP20.68■□□□□ 0.9
SMARCC2-203ENST00000394023 SH2D3AQ9BRG2 576 aa20.68■□□□□ 0.9
SMARCC2-203ENST00000394023 MRPL11Q9Y3B7 192 aaKnown RBP20.68■□□□□ 0.9
SMARCC2-203ENST00000394023 BCL9LQ86UU0 1499 aa20.68■□□□□ 0.9
SMARCC2-203ENST00000394023 MYH3P11055 1940 aa20.68■□□□□ 0.9
SMARCC2-203ENST00000394023 U2AF1L4Q8WU68 220 aaKnown RBP20.68■□□□□ 0.9
SMARCC2-203ENST00000394023 BLOC1S4Q9NUP1 217 aa20.68■□□□□ 0.9
SMARCC2-203ENST00000394023 ECE1P42892 770 aa20.68■□□□□ 0.9
SMARCC2-203ENST00000394023 EN1Q05925 392 aaPredicted RBP20.68■□□□□ 0.9
SMARCC2-203ENST00000394023 TUBBP07437 444 aa20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 SSR1P43307 286 aaKnown RBP20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 CCDC93Q567U6 631 aa20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 MIER3Q7Z3K6 550 aa20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 SLIT2O94813 1529 aa20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 KCNH2Q12809 1159 aa20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 WDR78Q5VTH9 848 aa20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 IRF2BP1Q8IU81 584 aa20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 VSNL1P62760 191 aa20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 AP3B2Q13367 1082 aa20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 TERF2Q15554 542 aa20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 IFI16Q16666 785 aaKnown RBP20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 HYOU1Q9Y4L1 999 aa20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 TESPA1A2RU30 521 aaPredicted RBP20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 LRRC10BA6NIK2 292 aa20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 ORC2Q13416 577 aaPredicted RBP20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 C15orf52Q6ZUT6 534 aaKnown RBP20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 IQCDQ96DY2 449 aa20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 MMS19Q96T76 1030 aa20.67■□□□□ 0.9
SMARCC2-203ENST00000394023 NWD2Q9ULI1 1742 aa20.66■□□□□ 0.9
SMARCC2-203ENST00000394023 ZSCAN20P17040 1043 aaPredicted RBP20.66■□□□□ 0.9
SMARCC2-203ENST00000394023 RXRBP28702 533 aa20.66■□□□□ 0.9
SMARCC2-203ENST00000394023 PCIF1Q9H4Z3 704 aa20.66■□□□□ 0.9
SMARCC2-203ENST00000394023 KCND1Q9NSA2 647 aa20.66■□□□□ 0.9
SMARCC2-203ENST00000394023 UBR2Q8IWV8 1755 aa20.66■□□□□ 0.9
SMARCC2-203ENST00000394023 FLOT1O75955 427 aa20.66■□□□□ 0.9
SMARCC2-203ENST00000394023 H2AFXP16104 143 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms