RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 VEZTQ9HBM0 779 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 FAM184BQ9ULE4 1060 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 JRKLQ9Y4A0 524 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 CAPN6Q9Y6Q1 641 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 OPA1O60313 960 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 TAL1P17542 331 aaPredicted RBP11.98□□□□□ -0.49
BRF1-204ENST00000392557 KIF11P52732 1056 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 VAV2P52735 878 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 USH1GQ495M9 461 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 PACS2Q86VP3 889 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 DNAJC7Q99615 494 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 TSGA10Q9BZW7 698 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 SWAP70Q9UH65 585 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 PCDHA13Q9Y5I0 950 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 ERLIN2O94905 339 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 CCNE1P24864 410 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 PDCLQ13371 301 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 DACT2Q5SW24 774 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 STRIP1Q5VSL9 837 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 GALNT17Q6IS24 598 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 SH2D3CQ8N5H7 860 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 JMJD4Q9H9V9 463 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 ANKRD31Q8N7Z5 1873 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 DDX60LQ5H9U9 1706 aaKnown RBP11.97□□□□□ -0.49
BRF1-204ENST00000392557 HPDP32754 393 aaPredicted RBP11.97□□□□□ -0.49
BRF1-204ENST00000392557 ZNF543Q08ER8 600 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 MS4A14Q96JA4 679 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 DNAJC18Q9H819 358 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 KANSL2Q9H9L4 492 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 ZBTB12Q9Y330 459 aaPredicted RBP11.97□□□□□ -0.49
BRF1-204ENST00000392557 A0A1W2PQC6 194 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 USP17L15C9J2P7 530 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 USP17L13C9JLJ4 530 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 USP17L11C9JVI0 530 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 USP17L18D6R9N7 530 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 USP17L22D6RA61 530 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 USP17L17D6RBQ6 530 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 USP17L19D6RCP7 530 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 USP17L20D6RJB6 530 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 ICA1Q05084 483 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 SLC20A2Q08357 652 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 USP17L24Q0WX57 530 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 ZYXQ15942 572 aaKnown RBP11.97□□□□□ -0.49
BRF1-204ENST00000392557 ODF2Q5BJF6 829 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 CFAP58Q5T655 872 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 USP17L6PQ6QN14 398 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 LARGE2Q8N3Y3 721 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 SPATA4Q8NEY3 305 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 ZNF277Q9NRM2 450 aaPredicted RBP11.97□□□□□ -0.49
BRF1-204ENST00000392557 FAM198AQ9UFP1 575 aa11.97□□□□□ -0.49
BRF1-204ENST00000392557 POTEMA6NI47 508 aa11.96□□□□□ -0.49
BRF1-204ENST00000392557 M0R2N6 131 aa11.96□□□□□ -0.49
BRF1-204ENST00000392557 GUCY2DQ02846 1103 aa11.96□□□□□ -0.49
BRF1-204ENST00000392557 GFPT1Q06210 699 aaPredicted RBP11.96□□□□□ -0.49
BRF1-204ENST00000392557 CALCRLQ16602 461 aa11.96□□□□□ -0.49
BRF1-204ENST00000392557 PAPD7Q5XG87 772 aaKnown RBP11.96□□□□□ -0.49
BRF1-204ENST00000392557 SLFN13Q68D06 897 aa11.96□□□□□ -0.49
BRF1-204ENST00000392557 CNNM4Q6P4Q7 775 aa11.96□□□□□ -0.49
BRF1-204ENST00000392557 SV2BQ7L1I2 683 aa11.96□□□□□ -0.49
BRF1-204ENST00000392557 KLHL7Q8IXQ5 586 aa11.96□□□□□ -0.49
BRF1-204ENST00000392557 CCDC170Q8IYT3 715 aa11.96□□□□□ -0.49
BRF1-204ENST00000392557 DHTKD1Q96HY7 919 aaPredicted RBP11.96□□□□□ -0.49
BRF1-204ENST00000392557 PRMT6Q96LA8 375 aaPredicted RBP11.96□□□□□ -0.49
BRF1-204ENST00000392557 ZDHHC15Q96MV8 337 aa11.96□□□□□ -0.49
BRF1-204ENST00000392557 CSRNP1Q96S65 589 aa11.96□□□□□ -0.49
BRF1-204ENST00000392557 VIPAS39Q9H9C1 493 aa11.96□□□□□ -0.49
BRF1-204ENST00000392557 PI4KBQ9UBF8 816 aa11.96□□□□□ -0.49
BRF1-204ENST00000392557 DLEC1Q9Y238 1755 aa11.96□□□□□ -0.5
BRF1-204ENST00000392557 NOP2P46087 812 aaKnown RBP11.96□□□□□ -0.5
BRF1-204ENST00000392557 IRAK1P51617 712 aa11.96□□□□□ -0.5
BRF1-204ENST00000392557 PPFIA1Q13136 1202 aa11.96□□□□□ -0.5
BRF1-204ENST00000392557 NAALADL2Q58DX5 795 aa11.96□□□□□ -0.5
BRF1-204ENST00000392557 CCDC155Q8N6L0 562 aa11.96□□□□□ -0.5
BRF1-204ENST00000392557 RIOX1Q9H6W3 641 aa11.96□□□□□ -0.5
BRF1-204ENST00000392557 SNX12Q9UMY4 172 aa11.96□□□□□ -0.5
BRF1-204ENST00000392557 ADAMTSL1Q8N6G6 1762 aa11.96□□□□□ -0.5
BRF1-204ENST00000392557 LRRC53A6NM62 1247 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 TRAF5O00463 557 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 SLC37A4O43826 429 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 FTCDO95954 541 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 KRT14P02533 472 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 KRT18P05783 430 aaKnown RBP11.95□□□□□ -0.5
BRF1-204ENST00000392557 INPP5BP32019 993 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 SETQ01105 290 aaPredicted RBP11.95□□□□□ -0.5
BRF1-204ENST00000392557 TTI2Q6NXR4 508 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 DAGLBQ8NCG7 672 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 GIMAP8Q8ND71 665 aaPredicted RBP11.95□□□□□ -0.5
BRF1-204ENST00000392557 OSBPL9Q96SU4 736 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 PACSIN2Q9UNF0 486 aaPredicted RBP11.95□□□□□ -0.5
BRF1-204ENST00000392557 HYOU1Q9Y4L1 999 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 FAM169AQ9Y6X4 670 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 GOLGA6L10A6NI86 522 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 GH2P01242 217 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 NT5C2P49902 561 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 SF3B2Q13435 895 aaKnown RBP11.95□□□□□ -0.5
BRF1-204ENST00000392557 RAPGEF1Q13905 1077 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 POTEAQ6S8J7 498 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 TEX2Q8IWB9 1127 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 NELFCDQ8IXH7 590 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 CCDC43Q96MW1 224 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms