RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 TKFCQ3LXA3 575 aa9.82□□□□□ -0.84
TRAV17-201ENST00000390445 SYDE2Q5VT97 1194 aa9.82□□□□□ -0.84
TRAV17-201ENST00000390445 BTNL9Q6UXG8 535 aa9.82□□□□□ -0.84
TRAV17-201ENST00000390445 MFSD6Q6ZSS7 791 aa9.82□□□□□ -0.84
TRAV17-201ENST00000390445 SLC17A8Q8NDX2 589 aa9.82□□□□□ -0.84
TRAV17-201ENST00000390445 GUCD1Q96NT3 240 aa9.82□□□□□ -0.84
TRAV17-201ENST00000390445 TCP11L1Q9NUJ3 509 aa9.82□□□□□ -0.84
TRAV17-201ENST00000390445 TMEM39AQ9NV64 488 aa9.82□□□□□ -0.84
TRAV17-201ENST00000390445 GNEQ9Y223 722 aaKnown RBP9.82□□□□□ -0.84
TRAV17-201ENST00000390445 LOXHD1Q8IVV2 1947 aa9.82□□□□□ -0.84
TRAV17-201ENST00000390445 CAPN5O15484 640 aaPredicted RBP9.81□□□□□ -0.84
TRAV17-201ENST00000390445 TNFAIP2Q03169 654 aa9.81□□□□□ -0.84
TRAV17-201ENST00000390445 ZNF543Q08ER8 600 aa9.81□□□□□ -0.84
TRAV17-201ENST00000390445 BAATQ14032 418 aaPredicted RBP9.81□□□□□ -0.84
TRAV17-201ENST00000390445 GNASQ5JWF2 1037 aa9.81□□□□□ -0.84
TRAV17-201ENST00000390445 TAPT1Q6NXT6 567 aa9.81□□□□□ -0.84
TRAV17-201ENST00000390445 CXCL17Q6UXB2 119 aa9.81□□□□□ -0.84
TRAV17-201ENST00000390445 SLC30A10Q6XR72 485 aa9.81□□□□□ -0.84
TRAV17-201ENST00000390445 NOL8Q76FK4 1167 aaKnown RBP9.81□□□□□ -0.84
TRAV17-201ENST00000390445 ANKRD33Q7Z3H0 272 aa9.81□□□□□ -0.84
TRAV17-201ENST00000390445 TLK2Q86UE8 772 aa9.81□□□□□ -0.84
TRAV17-201ENST00000390445 NUP133Q8WUM0 1156 aa9.81□□□□□ -0.84
TRAV17-201ENST00000390445 VTI1AQ96AJ9 217 aa9.81□□□□□ -0.84
TRAV17-201ENST00000390445 GLT1D1Q96MS3 346 aa9.81□□□□□ -0.84
TRAV17-201ENST00000390445 SUPT16HQ9Y5B9 1047 aaKnown RBP9.81□□□□□ -0.84
TRAV17-201ENST00000390445 PTPDC1A2A3K4 754 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 ASB14A6NK59 587 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 DCDC2CA8MYV0 355 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 B4E1Z4 1266 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 LZTS3O60299 673 aaPredicted RBP9.8□□□□□ -0.84
TRAV17-201ENST00000390445 CALML3P27482 149 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 CDK7P50613 346 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 ALDH5A1P51649 535 aaPredicted RBP9.8□□□□□ -0.84
TRAV17-201ENST00000390445 USP4Q13107 963 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 AAMPQ13685 434 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 Q6ZVU0 165 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 KDF1Q8NAX2 398 aaPredicted RBP9.8□□□□□ -0.84
TRAV17-201ENST00000390445 PCSK9Q8NBP7 692 aaKnown RBP9.8□□□□□ -0.84
TRAV17-201ENST00000390445 CLEC4DQ8WXI8 215 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 TOX2Q96NM4 488 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 UBA5Q9GZZ9 404 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 SPC25Q9HBM1 224 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 DIAPH3Q9NSV4 1193 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 TBX21Q9UL17 535 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 NOD1Q9Y239 953 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 STXBP5LQ9Y2K9 1186 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 ELP1O95163 1332 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 VCANP13611 3396 aa9.8□□□□□ -0.84
TRAV17-201ENST00000390445 TCF20Q9UGU0 1960 aaKnown RBP9.79□□□□□ -0.84
TRAV17-201ENST00000390445 A0A0U1RQG5 324 aaPredicted RBP9.79□□□□□ -0.84
TRAV17-201ENST00000390445 ARVCFO00192 962 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 ZNF213O14771 459 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 ST8SIA5O15466 376 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 DYNC1LI2O43237 492 aaPredicted RBP9.79□□□□□ -0.84
TRAV17-201ENST00000390445 TIMP1P01033 207 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 SNHG28P0DPA3 235 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 GSPT1P15170 499 aaKnown RBP9.79□□□□□ -0.84
TRAV17-201ENST00000390445 PSMC6P62333 389 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 CLDN10P78369 228 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 FPGSQ05932 587 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 FSCN1Q16658 493 aaKnown RBP9.79□□□□□ -0.84
TRAV17-201ENST00000390445 USH1GQ495M9 461 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 KIAA1211Q6ZU35 1233 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 TICAM2Q86XR7 235 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 FAM126BQ8IXS8 530 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 MEIOBQ8N635 442 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 PPP1R13LQ8WUF5 828 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 ESR2Q92731 530 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 RNPC3Q96LT9 517 aaKnown RBP9.79□□□□□ -0.84
TRAV17-201ENST00000390445 TTC14Q96N46 770 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRAV17-201ENST00000390445 TTYH1Q9H313 450 aaPredicted RBP9.79□□□□□ -0.84
TRAV17-201ENST00000390445 RNF41Q9H4P4 317 aaPredicted RBP9.79□□□□□ -0.84
TRAV17-201ENST00000390445 KIAA1024Q9UPX6 916 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 PCDHGA11Q9Y5H2 935 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 WDR81Q562E7 1941 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 GRIN2DO15399 1336 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 UMODL1Q5DID0 1318 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 MROH7Q68CQ1 1323 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 CUL9Q8IWT3 2517 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 A0A0C4DFX4 3053 aa9.79□□□□□ -0.84
TRAV17-201ENST00000390445 STAU1O95793 577 aaKnown RBP9.78□□□□□ -0.84
TRAV17-201ENST00000390445 ADH1AP07327 375 aa9.78□□□□□ -0.84
TRAV17-201ENST00000390445 ACRP10323 421 aa9.78□□□□□ -0.84
TRAV17-201ENST00000390445 PCP11498 1178 aaKnown RBP9.78□□□□□ -0.84
TRAV17-201ENST00000390445 CSF2RAP15509 400 aa9.78□□□□□ -0.84
TRAV17-201ENST00000390445 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
TRAV17-201ENST00000390445 MFAP1P55081 439 aaKnown RBP9.78□□□□□ -0.84
TRAV17-201ENST00000390445 NKX3-2P78367 333 aa9.78□□□□□ -0.84
TRAV17-201ENST00000390445 FAM109BQ6ICB4 259 aaPredicted RBP9.78□□□□□ -0.84
TRAV17-201ENST00000390445 RNF207Q6ZRF8 634 aa9.78□□□□□ -0.84
TRAV17-201ENST00000390445 C16orf59Q7L2K0 433 aa9.78□□□□□ -0.84
TRAV17-201ENST00000390445 MORC4Q8TE76 937 aa9.78□□□□□ -0.84
TRAV17-201ENST00000390445 TBC1D5Q92609 795 aa9.78□□□□□ -0.84
TRAV17-201ENST00000390445 AP5M1Q9H0R1 490 aa9.78□□□□□ -0.84
TRAV17-201ENST00000390445 SEMA6BQ9H3T3 888 aa9.78□□□□□ -0.84
TRAV17-201ENST00000390445 VTA1Q9NP79 307 aa9.78□□□□□ -0.84
TRAV17-201ENST00000390445 MICAL3Q7RTP6 2002 aa9.78□□□□□ -0.84
TRAV17-201ENST00000390445 TNKSO95271 1327 aa9.78□□□□□ -0.84
TRAV17-201ENST00000390445 LCE2BO14633 110 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms