RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 TRIM58Q8NG06 486 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 NEK11Q8NG66 645 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 ETNPPLQ8TBG4 499 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 SYN2Q92777 582 aaPredicted RBP16.55■□□□□ 0.24
SCFD2-201ENST00000388940 ZNF622Q969S3 477 aaKnown RBP eCLIP16.55■□□□□ 0.242e-6■□□□□ 8.5
SCFD2-201ENST00000388940 NUCKS1Q9H1E3 243 aaKnown RBP16.55■□□□□ 0.24
SCFD2-201ENST00000388940 ABCB6Q9NP58 842 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 SYNPO2Q9UMS6 1093 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 PCDHAC2Q9Y5I4 1007 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 COL2A1P02458 1487 aaPredicted RBP16.55■□□□□ 0.24
SCFD2-201ENST00000388940 ATRNL1Q5VV63 1379 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 SSU72P8A0A1W2PR75 194 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 TRAF5O00463 557 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 ECE2O60344 883 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 PLEKP08567 350 aaPredicted RBP16.55■□□□□ 0.24
SCFD2-201ENST00000388940 MCM3P25205 808 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 OAS2P29728 719 aaKnown RBP16.55■□□□□ 0.24
SCFD2-201ENST00000388940 EIF4A3P38919 411 aaKnown RBP16.55■□□□□ 0.24
SCFD2-201ENST00000388940 KIF11P52732 1056 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 USP14P54578 494 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 SLC12A3P55017 1021 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 VSNL1P62760 191 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 SPIRE1Q08AE8 756 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 PPP4R3CPQ6ZMV5 832 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 GPBP1Q86WP2 473 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 TEX2Q8IWB9 1127 aa16.55■□□□□ 0.24
SCFD2-201ENST00000388940 POTEB3A0JP26 581 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 LRRC53A6NM62 1247 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 FAM196BA6NMK8 535 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 POTECB2RU33 542 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 PJA2O43164 708 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 ENTPD3O75355 529 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 MED24O75448 989 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 PRLRP16471 622 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 RBM5P52756 815 aaKnown RBP eCLIP16.54■□□□□ 0.24
SCFD2-201ENST00000388940 ABCB5Q2M3G0 1257 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 SHROOM1Q2M3G4 852 aaPredicted RBP16.54■□□□□ 0.24
SCFD2-201ENST00000388940 ASTE1Q2TB18 679 aaPredicted RBP16.54■□□□□ 0.24
SCFD2-201ENST00000388940 POTEBQ6S5H4 581 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 BTNL9Q6UXG8 535 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 RRAGAQ7L523 313 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 ERMNQ8TAM6 284 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 MMS19Q96T76 1030 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 IFIH1Q9BYX4 1025 aaKnown RBP16.54■□□□□ 0.24
SCFD2-201ENST00000388940 KCTD10Q9H3F6 313 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 SH2D4AQ9H788 454 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 JRKLQ9Y4A0 524 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 DUSP10Q9Y6W6 482 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 SLX4Q8IY92 1834 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 TARSL2A2RTX5 802 aaKnown RBP16.54■□□□□ 0.24
SCFD2-201ENST00000388940 TACC1O75410 805 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 SSBP05455 408 aaKnown RBP eCLIP16.54■□□□□ 0.24
SCFD2-201ENST00000388940 CIITAP33076 1130 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 SREBF1P36956 1147 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 EDRF1Q3B7T1 1238 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 CCDC40Q4G0X9 1142 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 FBXO11Q86XK2 927 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 TRIM59Q8IWR1 403 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 TXLNBQ8N3L3 684 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 EMILIN3Q9NT22 766 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 CEP72Q9P209 647 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 FAM184BQ9ULE4 1060 aa16.54■□□□□ 0.24
SCFD2-201ENST00000388940 RAD21O60216 631 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 ARSHQ5FYA8 562 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 HERC4Q5GLZ8 1057 aaPredicted RBP16.53■□□□□ 0.24
SCFD2-201ENST00000388940 SYDE2Q5VT97 1194 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 KRT26Q7Z3Y9 468 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 SCFD1Q8WVM8 642 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 FAM20AQ96MK3 541 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 P2RX7Q99572 595 aaKnown RBP16.53■□□□□ 0.24
SCFD2-201ENST00000388940 DEF6Q9H4E7 631 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 RBAK-RBAKDNI3L0D1 243 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 AKR1B10O60218 316 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 SRGAP2O75044 1071 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 NDUFB10O96000 172 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 RPA1P27694 616 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 CYP2C19P33261 490 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 GPS2Q13227 327 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 CACNA2D4Q7Z3S7 1137 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 CATSPER3Q86XQ3 398 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 KCTD17Q8N5Z5 321 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 LENG9Q96B70 501 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 FGFBP2Q9BYJ0 223 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 TANGO6Q9C0B7 1094 aa16.53■□□□□ 0.24
SCFD2-201ENST00000388940 MACROD2A1Z1Q3 448 aa16.52■□□□□ 0.24
SCFD2-201ENST00000388940 H0YIN7 160 aa16.52■□□□□ 0.24
SCFD2-201ENST00000388940 EIF3JO75822 258 aaKnown RBP16.52■□□□□ 0.24
SCFD2-201ENST00000388940 ITIH3Q06033 890 aa16.52■□□□□ 0.24
SCFD2-201ENST00000388940 HGSNATQ68CP4 663 aa16.52■□□□□ 0.24
SCFD2-201ENST00000388940 SYT2Q8N9I0 419 aaPredicted RBP16.52■□□□□ 0.24
SCFD2-201ENST00000388940 POLR3GO15318 223 aaPredicted RBP16.51■□□□□ 0.23
SCFD2-201ENST00000388940 NOL4O94818 638 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 CYP3A4P08684 503 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 BMP3P12645 472 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 STAT3P40763 770 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 PRR16Q569H4 304 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 IQCEQ6IPM2 695 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 ZNF572Q7Z3I7 529 aaPredicted RBP16.51■□□□□ 0.23
SCFD2-201ENST00000388940 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.51■□□□□ 0.23
SCFD2-201ENST00000388940 TBC1D7Q9P0N9 293 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms