RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 COL6A1P12109 1028 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 FXNQ16595 210 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 SLC10A6Q3KNW5 377 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 PHF19Q5T6S3 580 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 ZNF585AQ6P3V2 769 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 TRMT10BQ6PF06 316 aaKnown RBP4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 ARHGEF18Q6ZSZ5 1173 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 CIR1Q86X95 450 aaPredicted RBP4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 PALM2Q8IXS6 379 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 Q8N1X5 172 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 KLHL36Q8N4N3 616 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 PHOSPHO1Q8TCT1 267 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 PTPN18Q99952 460 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 MEGF9Q9H1U4 602 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 SMOC1Q9H4F8 434 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 JADE2Q9NQC1 790 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 PPARGC1AQ9UBK2 798 aaKnown RBP4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 ASH2LQ9UBL3 628 aa4.31□□□□□ -1.72
RNU6-1040P-201ENST00000383974 KRIT1O00522 736 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 MAFKO60675 156 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 GJB6O95452 261 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 ETFBP38117 255 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 PPP2CBP62714 309 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 PPP2R2AP63151 447 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 PPP2CAP67775 309 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 MAP4K2Q12851 820 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 NFATC3Q12968 1075 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 SLFN13Q68D06 897 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 CRIP3Q6Q6R5 217 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 EEPD1Q7L9B9 569 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 PROSER1Q86XN7 944 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 TTLL11Q8NHH1 800 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 PIP4K2CQ8TBX8 421 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 SORCS2Q96PQ0 1159 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 CDK5RAP1Q96SZ6 601 aaKnown RBP4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 BARX1Q9HBU1 254 aaPredicted RBP4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 SLC6A20Q9NP91 592 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 HSPBP1Q9NZL4 362 aa4.3□□□□□ -1.72
RNU6-1040P-201ENST00000383974 PATE3B3GLJ2 98 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 SLC27A2O14975 620 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 SUV39H1O43463 412 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 B4GALT4O60513 344 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 MSCO60682 206 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 SLPIP03973 132 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 GRIN1Q05586 938 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 R3HDM1Q15032 1099 aaKnown RBP4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 VASNQ6EMK4 673 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 CYP4F22Q6NT55 531 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 DTX3Q8N9I9 347 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 NUDT10Q8NFP7 164 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 KCTD13Q8WZ19 329 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 NUDT11Q96G61 164 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 WWC2-AS2Q96NR7 200 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 IER2Q9BTL4 223 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 PHF20Q9BVI0 1012 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 JAM3Q9BX67 310 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 EPN3Q9H201 632 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 DEF6Q9H4E7 631 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 ZNF408Q9H9D4 720 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 DLL4Q9NR61 685 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 GPR27Q9NS67 375 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 ADAM29Q9UKF5 820 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 ZDHHC9Q9Y397 364 aa4.29□□□□□ -1.72
RNU6-1040P-201ENST00000383974 A0A1W2PQU0 124 aa4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 AGRPO00253 132 aa4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 DLX3O60479 287 aa4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 KLHL18O94889 574 aa4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 GDF5P43026 501 aa4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 SELENOPP49908 381 aa4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 USP53Q70EK8 1073 aa4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 RALYLQ86SE5 291 aaKnown RBP4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 VPS37DQ86XT2 251 aa4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 TRIM48Q8IWZ4 208 aa4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 ZFPM1Q8IX07 1006 aa4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 RBM12BQ8IXT5 1001 aaKnown RBP4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 CLEC4DQ8WXI8 215 aa4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 ZNF747Q9BV97 191 aa4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 VPS11Q9H270 941 aa4.28□□□□□ -1.72
RNU6-1040P-201ENST00000383974 MUSKO15146 869 aa4.27□□□□□ -1.73
RNU6-1040P-201ENST00000383974 CNOT4O95628 575 aaKnown RBP4.27□□□□□ -1.73
RNU6-1040P-201ENST00000383974 LTFP02788 710 aa4.27□□□□□ -1.73
RNU6-1040P-201ENST00000383974 FGRP09769 529 aa4.27□□□□□ -1.73
RNU6-1040P-201ENST00000383974 ERCC5P28715 1186 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1040P-201ENST00000383974 SMAD2Q15796 467 aaKnown RBP4.27□□□□□ -1.73
RNU6-1040P-201ENST00000383974 SPDYAQ5MJ70 313 aa4.27□□□□□ -1.73
RNU6-1040P-201ENST00000383974 ZFP69BQ9UJL9 534 aa4.27□□□□□ -1.73
RNU6-1040P-201ENST00000383974 TCAF1Q9Y4C2 921 aa4.27□□□□□ -1.73
RNU6-1040P-201ENST00000383974 ZNF623O75123 536 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 KNG1P01042 644 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 GRK2P25098 689 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 GRK3P35626 688 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 ACVRL1P37023 503 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 GLRBP48167 497 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 HMGA2P52926 109 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 TUSC3Q13454 348 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 SKIDA1Q1XH10 827 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 PAN2Q504Q3 1202 aaKnown RBP4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 CD276Q5ZPR3 534 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms