RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 MYSM1Q5VVJ2 828 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 PPP1R13LQ8WUF5 828 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 RNPC3Q96LT9 517 aaKnown RBP13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 SLC26A6Q9BXS9 759 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 TMEM260Q9NX78 707 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 TPCN1Q9ULQ1 816 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 PCDHA6Q9UN73 950 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 PCDHA8Q9Y5H6 950 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 LOXHD1Q8IVV2 1947 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 TMEM265A0A087WTH1 108 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 SMCO2A6NFE2 343 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 SPDYE3A6NKU9 549 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 SPATA31C2B4DYI2 1134 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 GGPS1O95749 300 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 ITGB5P18084 799 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 SCRN1Q12765 414 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 GRIN2CQ14957 1233 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 HSDL1Q3SXM5 330 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 CELF3Q5SZQ8 465 aaKnown RBP13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 XRRA1Q6P2D8 792 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 TEX2Q8IWB9 1127 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 PPTC7Q8NI37 304 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 KAT2BQ92831 832 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 VTI1AQ96AJ9 217 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 KIF2CQ99661 725 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 MTG1Q9BT17 334 aaPredicted RBP13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 ANO3Q9BYT9 981 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 ZMYND12Q9H0C1 365 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 PRDM6Q9NQX0 595 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 RTEL1Q9NZ71 1219 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 CHD7Q9P2D1 2997 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 TELO2Q9Y4R8 837 aa13.23□□□□□ -0.29
APOBEC3F-202ENST00000381565 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 DCDC2CA8MYV0 355 aa13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 FIBPO43427 364 aa13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 B4GALT4O60513 344 aa13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 PFKFB2O60825 505 aa13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 DTNBO60941 627 aa13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 ZNF286BP0CG31 522 aa13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 TGFB3P10600 412 aa13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 CLCN6P51797 869 aa13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 GNPTABQ3T906 1256 aa13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 KCNV1Q6PIU1 500 aa13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 CRYGNQ8WXF5 182 aa13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 AIFM3Q96NN9 605 aa13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 VPS54Q9P1Q0 977 aa13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 UBIAD1Q9Y5Z9 338 aa13.22□□□□□ -0.29
APOBEC3F-202ENST00000381565 REV3LO60673 3130 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 KPNA6O60684 536 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 EIF5BO60841 1220 aaKnown RBP13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 CTDNEP1O95476 244 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 F2P00734 622 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 RAG1P15918 1043 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 KCNA2P16389 499 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 DNAJB2P25686 324 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 SREBF1P36956 1147 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 FPGSQ05932 587 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 ST3GAL1Q11201 340 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 AP3B2Q13367 1082 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 PDAP1Q13442 181 aaKnown RBP13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 LAMC2Q13753 1193 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 NBPF20Q3BBV1 942 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 BRDTQ58F21 947 aaPredicted RBP13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 DHX37Q8IY37 1157 aaKnown RBP13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 GPRASP2Q96D09 838 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 TRPV6Q9H1D0 765 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 TMEM39AQ9NV64 488 aa13.21□□□□□ -0.29
APOBEC3F-202ENST00000381565 XIRP2A4UGR9 3374 aa13.21□□□□□ -0.3
APOBEC3F-202ENST00000381565 UMODL1Q5DID0 1318 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 HAS3O00219 553 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 ATP9AO75110 1047 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 FOSP01100 380 aaPredicted RBP13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 NPY5RQ15761 445 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 DGKDQ16760 1214 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 ME3Q16798 604 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 JAKMIP3Q5VZ66 844 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 METTL7BQ6UX53 244 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 C16orf59Q7L2K0 433 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 CYFIP1Q7L576 1253 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 REXO1Q8N1G1 1221 aaKnown RBP13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 CYP2W1Q8TAV3 490 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 RASGRP4Q8TDF6 673 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 SPATA33Q96N06 139 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 CTAGE1Q96RT6 745 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 SEZ6LQ9BYH1 1024 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 GLT8D2Q9H1C3 349 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 TRMT13Q9NUP7 481 aaKnown RBP13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 TRPC6Q9Y210 931 aa13.2□□□□□ -0.3
APOBEC3F-202ENST00000381565 STK36Q9NRP7 1315 aa13.19□□□□□ -0.3
APOBEC3F-202ENST00000381565 CPLX1O14810 134 aa13.19□□□□□ -0.3
APOBEC3F-202ENST00000381565 TLR3O15455 904 aaKnown RBP13.19□□□□□ -0.3
APOBEC3F-202ENST00000381565 GALR2O43603 387 aaPredicted RBP13.19□□□□□ -0.3
APOBEC3F-202ENST00000381565 DEXIO95424 95 aa13.19□□□□□ -0.3
APOBEC3F-202ENST00000381565 TIMP1P01033 207 aa13.19□□□□□ -0.3
APOBEC3F-202ENST00000381565 NEK4P51957 841 aa13.19□□□□□ -0.3
APOBEC3F-202ENST00000381565 AKAP17AQ02040 695 aaKnown RBP13.19□□□□□ -0.3
APOBEC3F-202ENST00000381565 SSRP1Q08945 709 aaKnown RBP13.19□□□□□ -0.3
APOBEC3F-202ENST00000381565 ANKRD1Q15327 319 aa13.19□□□□□ -0.3
APOBEC3F-202ENST00000381565 RASIP1Q5U651 963 aa13.19□□□□□ -0.3
APOBEC3F-202ENST00000381565 NFRKBQ6P4R8 1299 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms