RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 SLC26A4O43511 780 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 BUB1O43683 1085 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 HOXA10P31260 410 aaPredicted RBP18.01■□□□□ 0.47
VPS16-203ENST00000380469 POLR2FP61218 127 aaKnown RBP18.01■□□□□ 0.47
VPS16-203ENST00000380469 EZH2Q15910 746 aaKnown RBP18.01■□□□□ 0.47
VPS16-203ENST00000380469 HERC4Q5GLZ8 1057 aaPredicted RBP18.01■□□□□ 0.47
VPS16-203ENST00000380469 SND1Q7KZF4 910 aaKnown RBP eCLIP18.01■□□□□ 0.47
VPS16-203ENST00000380469 HINFPQ9BQA5 517 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 COA1Q9GZY4 146 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 RNF14Q9UBS8 474 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 SALL4Q9UJQ4 1053 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 NCK2O43639 380 aa18■□□□□ 0.47
VPS16-203ENST00000380469 KRT18P05783 430 aaKnown RBP18■□□□□ 0.47
VPS16-203ENST00000380469 HLA-DOAP06340 250 aa18■□□□□ 0.47
VPS16-203ENST00000380469 GYS1P13807 737 aa18■□□□□ 0.47
VPS16-203ENST00000380469 EPS15P42566 896 aa18■□□□□ 0.47
VPS16-203ENST00000380469 CFAP221Q4G0U5 840 aa18■□□□□ 0.47
VPS16-203ENST00000380469 GPBP1Q86WP2 473 aa18■□□□□ 0.47
VPS16-203ENST00000380469 NELFCDQ8IXH7 590 aa18■□□□□ 0.47
VPS16-203ENST00000380469 HDAC7Q8WUI4 952 aa18■□□□□ 0.47
VPS16-203ENST00000380469 RIN2Q8WYP3 895 aaPredicted RBP18■□□□□ 0.47
VPS16-203ENST00000380469 MTMR8Q96EF0 704 aa18■□□□□ 0.47
VPS16-203ENST00000380469 DMGDHQ9UI17 866 aaKnown RBP18■□□□□ 0.47
VPS16-203ENST00000380469 ATF5Q9Y2D1 282 aaPredicted RBP18■□□□□ 0.47
VPS16-203ENST00000380469 NOL4O94818 638 aa18■□□□□ 0.47
VPS16-203ENST00000380469 SHMT1P34896 483 aa18■□□□□ 0.47
VPS16-203ENST00000380469 KLHDC7AQ5VTJ3 777 aa18■□□□□ 0.47
VPS16-203ENST00000380469 LRRC31Q6UY01 552 aa18■□□□□ 0.47
VPS16-203ENST00000380469 TMC4Q7Z404 712 aa18■□□□□ 0.47
VPS16-203ENST00000380469 TLR10Q9BXR5 811 aa18■□□□□ 0.47
VPS16-203ENST00000380469 EMILIN3Q9NT22 766 aa18■□□□□ 0.47
VPS16-203ENST00000380469 STIM2Q9P246 746 aa18■□□□□ 0.47
VPS16-203ENST00000380469 ATP6V0A2Q9Y487 856 aa18■□□□□ 0.47
VPS16-203ENST00000380469 AGPSO00116 658 aa17.99■□□□□ 0.47
VPS16-203ENST00000380469 TOM1O60784 492 aa17.99■□□□□ 0.47
VPS16-203ENST00000380469 USP11P51784 963 aa17.99■□□□□ 0.47
VPS16-203ENST00000380469 EPHB4P54760 987 aa17.99■□□□□ 0.47
VPS16-203ENST00000380469 MARSP56192 900 aaKnown RBP17.99■□□□□ 0.47
VPS16-203ENST00000380469 SLC7A5Q01650 507 aa17.99■□□□□ 0.47
VPS16-203ENST00000380469 GLE1Q53GS7 698 aaKnown RBP17.99■□□□□ 0.47
VPS16-203ENST00000380469 TRIM59Q8IWR1 403 aa17.99■□□□□ 0.47
VPS16-203ENST00000380469 FAM76AQ8TAV0 307 aa17.99■□□□□ 0.47
VPS16-203ENST00000380469 USP21Q9UK80 565 aa17.99■□□□□ 0.47
VPS16-203ENST00000380469 PCDHA2Q9Y5H9 948 aa17.99■□□□□ 0.47
VPS16-203ENST00000380469 ADAM9Q13443 819 aa17.99■□□□□ 0.47
VPS16-203ENST00000380469 C8orf74Q6P047 294 aa17.99■□□□□ 0.47
VPS16-203ENST00000380469 MYH7BA7E2Y1 1941 aa17.99■□□□□ 0.47
VPS16-203ENST00000380469 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 POTEB3A0JP26 581 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 GOLGA6CA6NDK9 693 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 POTECB2RU33 542 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 GOLGA6DP0CG33 693 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 EMBQ6PCB8 327 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 POTEBQ6S5H4 581 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 PPP4R3CPQ6ZMV5 832 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 SRLQ86TD4 932 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 SP8Q8IXZ3 490 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.98■□□□□ 0.47
VPS16-203ENST00000380469 GOLGA6AQ9NYA3 693 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 SMARCAL1Q9NZC9 954 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 RRP15Q9Y3B9 282 aaKnown RBP17.98■□□□□ 0.47
VPS16-203ENST00000380469 LTBP4Q8N2S1 1624 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 NPHP3-ACAD11A0A0J9YXS1 232 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 USP17L15C9J2P7 530 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 USP17L13C9JLJ4 530 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 USP17L11C9JVI0 530 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 USP17L18D6R9N7 530 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 USP17L22D6RA61 530 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 USP17L17D6RBQ6 530 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 USP17L19D6RCP7 530 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 USP17L20D6RJB6 530 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 PPEF1O14829 653 aaPredicted RBP17.98■□□□□ 0.47
VPS16-203ENST00000380469 CETN3O15182 167 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 OPA1O60313 960 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 TLR2O60603 784 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 USP17L24Q0WX57 530 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 RAPGEF1Q13905 1077 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 NAB2Q15742 525 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 HAUS3Q68CZ6 603 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 USP17L6PQ6QN14 398 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 SLFN12Q8IYM2 578 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 SCFD1Q8WVM8 642 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 TBC1D5Q92609 795 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 UIMC1Q96RL1 719 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 FGFBP2Q9BYJ0 223 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 TRIM34Q9BYJ4 488 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 ZHX3Q9H4I2 956 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 LRRC4BQ9NT99 713 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 EHD2Q9NZN4 543 aa17.98■□□□□ 0.47
VPS16-203ENST00000380469 MYO1CO00159 1063 aa17.97■□□□□ 0.47
VPS16-203ENST00000380469 RAD21O60216 631 aa17.97■□□□□ 0.47
VPS16-203ENST00000380469 CYP11B2P19099 503 aa17.97■□□□□ 0.47
VPS16-203ENST00000380469 TNFRSF8P28908 595 aa17.97■□□□□ 0.47
VPS16-203ENST00000380469 SLC18A3Q16572 532 aa17.97■□□□□ 0.47
VPS16-203ENST00000380469 CCDC17Q96LX7 622 aa17.97■□□□□ 0.47
VPS16-203ENST00000380469 ZC3H12CQ9C0D7 883 aaKnown RBP17.97■□□□□ 0.47
VPS16-203ENST00000380469 KCTD10Q9H3F6 313 aa17.97■□□□□ 0.47
VPS16-203ENST00000380469 KCNMB3Q9NPA1 279 aa17.97■□□□□ 0.47
VPS16-203ENST00000380469 FEZ2Q9UHY8 353 aaPredicted RBP17.97■□□□□ 0.47
VPS16-203ENST00000380469 PCDHA1Q9Y5I3 950 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms