RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ECHDC1Q9NTX5 307 aa10.21□□□□□ -0.78
PTPRA-204ENST00000380393 HSFX1Q9UBD0 423 aa10.21□□□□□ -0.78
PTPRA-204ENST00000380393 SEL1LQ9UBV2 794 aa10.21□□□□□ -0.78
PTPRA-204ENST00000380393 F8W031 263 aaPredicted RBP10.2□□□□□ -0.78
PTPRA-204ENST00000380393 ACTN4O43707 911 aaKnown RBP10.2□□□□□ -0.78
PTPRA-204ENST00000380393 RAD21O60216 631 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 TACC1O75410 805 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 TCF7P36402 384 aaPredicted RBP10.2□□□□□ -0.78
PTPRA-204ENST00000380393 HALP42357 657 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 GPSM2P81274 684 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 HPCAP84074 193 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 NECTIN1Q15223 517 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 NACAP1Q9BZK3 213 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 CTTNBP2NLQ9P2B4 639 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 SLC12A6Q9UHW9 1150 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 NDUFB9Q9Y6M9 179 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 MYPNQ86TC9 1320 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 GNAT3A8MTJ3 354 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 UBOX5O94941 541 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 GNAZP19086 355 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 RPS6KB1P23443 525 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 C6orf183Q5T699 404 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 TBC1D9BQ66K14 1250 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 ADALQ6DHV7 355 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 OTUD7BQ6GQQ9 843 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 KLC3Q6P597 504 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 CCDC129Q6ZRS4 1044 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 SSH3Q8TE77 659 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 NCSTNQ92542 709 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 IFT74Q96LB3 600 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 ATP8A2Q9NTI2 1148 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 C9orf78Q9NZ63 289 aaPredicted RBP10.2□□□□□ -0.78
PTPRA-204ENST00000380393 DKK3Q9UBP4 350 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 KDM6AO15550 1401 aaPredicted RBP10.2□□□□□ -0.78
PTPRA-204ENST00000380393 MAGEB3O15480 346 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 PDE1BQ01064 536 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 STK38Q15208 465 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 KRT27Q7Z3Y8 459 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 CYP4X1Q8N118 509 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 NAP1L3Q99457 506 aaPredicted RBP10.2□□□□□ -0.78
PTPRA-204ENST00000380393 CCT7Q99832 543 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 MIS12Q9H081 205 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 JADE2Q9NQC1 790 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 PDP2Q9P2J9 529 aa10.2□□□□□ -0.78
PTPRA-204ENST00000380393 A0A0D9SFI3 127 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 A0A0G2JS52 829 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 POTEFA5A3E0 1075 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 MAGEA13PA6NCF6 341 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 TMEM110-MUSTN1A8MSY1 372 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 PSMD14O00487 310 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 POTEIP0CG38 1075 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 CALB2P22676 271 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 SYDE2Q5VT97 1194 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 DQX1Q8TE96 717 aaKnown RBP10.19□□□□□ -0.78
PTPRA-204ENST00000380393 CASP10Q92851 521 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 CHMP6Q96FZ7 201 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 DHTKD1Q96HY7 919 aaPredicted RBP10.19□□□□□ -0.78
PTPRA-204ENST00000380393 SMC6Q96SB8 1091 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 NDEL1Q9GZM8 345 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 NRDE2Q9H7Z3 1164 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 NCOA5Q9HCD5 579 aaKnown RBP10.19□□□□□ -0.78
PTPRA-204ENST00000380393 LUC7L2Q9Y383 392 aaKnown RBP10.19□□□□□ -0.78
PTPRA-204ENST00000380393 GOLGB1Q14789 3259 aaKnown RBP10.19□□□□□ -0.78
PTPRA-204ENST00000380393 GCOM1H8Y6P7 765 aaPredicted RBP10.19□□□□□ -0.78
PTPRA-204ENST00000380393 RGL2O15211 777 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 SART1O43290 800 aaKnown RBP10.19□□□□□ -0.78
PTPRA-204ENST00000380393 KDM1AO60341 852 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 MYZAPP0CAP1 466 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 SERPINB3P29508 390 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 SLC39A6Q13433 755 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 TOB2Q14106 344 aaPredicted RBP10.19□□□□□ -0.78
PTPRA-204ENST00000380393 PHLDB3Q6NSJ2 640 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 CHST3Q7LGC8 479 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 CD302Q8IX05 232 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 MAML3Q96JK9 1138 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 HAPLN3Q96S86 360 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 MAK16Q9BXY0 300 aaKnown RBP10.19□□□□□ -0.78
PTPRA-204ENST00000380393 CCDC68Q9H2F9 335 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 RNPEPL1Q9HAU8 725 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 ATAD3AQ9NVI7 634 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 GGT7Q9UJ14 662 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 SSX2IPQ9Y2D8 614 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 TMA7Q9Y2S6 64 aaKnown RBP10.19□□□□□ -0.78
PTPRA-204ENST00000380393 NEDD4P46934 1319 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 DLG5Q8TDM6 1919 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 PHRF1Q9P1Y6 1649 aaKnown RBP10.19□□□□□ -0.78
PTPRA-204ENST00000380393 ORC4O43929 436 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 RARAP10276 462 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 TEFQ10587 303 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 LRP8Q14114 963 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 WDR78Q5VTH9 848 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 PAPD7Q5XG87 772 aaKnown RBP10.19□□□□□ -0.78
PTPRA-204ENST00000380393 LSM14AQ8ND56 463 aaKnown RBP10.19□□□□□ -0.78
PTPRA-204ENST00000380393 GPR101Q96P66 508 aaPredicted RBP10.19□□□□□ -0.78
PTPRA-204ENST00000380393 PAG1Q9NWQ8 432 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 LRCH1Q9Y2L9 728 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 RGPD1P0DJD0 1748 aa10.19□□□□□ -0.78
PTPRA-204ENST00000380393 AFF2P51816 1311 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 MEGF6O75095 1541 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 E7ENQ6 273 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms