RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 PPP2R5CQ13362 524 aa22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 CSGALNACT2Q8N6G5 542 aa22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 ZNF577Q9BSK1 485 aa22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 TAB2Q9NYJ8 693 aa22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 OTOFQ9HC10 1997 aa22.12■■□□□ 1.13
PDLIM5-205ENST00000380180 NPHP3-ACAD11A0A0J9YXS1 232 aa22.12■■□□□ 1.13
PDLIM5-205ENST00000380180 DSG3P32926 999 aa22.12■■□□□ 1.13
PDLIM5-205ENST00000380180 RPS6P62753 249 aaKnown RBP22.12■■□□□ 1.13
PDLIM5-205ENST00000380180 COASYQ13057 564 aa22.12■■□□□ 1.13
PDLIM5-205ENST00000380180 COG2Q14746 738 aa22.12■■□□□ 1.13
PDLIM5-205ENST00000380180 ARSHQ5FYA8 562 aa22.12■■□□□ 1.13
PDLIM5-205ENST00000380180 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.12■■□□□ 1.13
PDLIM5-205ENST00000380180 SULF1Q8IWU6 871 aa22.12■■□□□ 1.13
PDLIM5-205ENST00000380180 SAMD3Q8N6K7 520 aa22.12■■□□□ 1.13
PDLIM5-205ENST00000380180 SEMA6BQ9H3T3 888 aa22.12■■□□□ 1.13
PDLIM5-205ENST00000380180 RGL1Q9NZL6 768 aa22.12■■□□□ 1.13
PDLIM5-205ENST00000380180 SRCAPQ6ZRS2 3230 aa22.12■■□□□ 1.13
PDLIM5-205ENST00000380180 ADM5C9JUS6 153 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 GAS7O60861 476 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 ITGB5P18084 799 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 PABPC4Q13310 644 aaKnown RBP eCLIP22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 CENPPQ6IPU0 288 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 GUF1Q8N442 669 aaKnown RBP22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 IL31RAQ8NI17 732 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 NOC3LQ8WTT2 800 aaKnown RBP22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 HSD17B14Q9BPX1 270 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 TMX1Q9H3N1 280 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 TMOD4Q9NZQ9 345 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 ADAMTS5Q9UNA0 930 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 RIPK3Q9Y572 518 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 CHMP2AO43633 222 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 NRDCO43847 1150 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 EEF1GP26641 437 aaKnown RBP22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 HOXA7P31268 230 aaPredicted RBP22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 CATSPERGQ6ZRH7 1159 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 SYT2Q8N9I0 419 aaPredicted RBP22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 REPS2Q8NFH8 660 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 TAAR1Q96RJ0 339 aa22.11■■□□□ 1.13
PDLIM5-205ENST00000380180 ADKP55263 362 aaKnown RBP22.1■■□□□ 1.13
PDLIM5-205ENST00000380180 MAP3K9P80192 1104 aa22.1■■□□□ 1.13
PDLIM5-205ENST00000380180 CACNB1Q02641 598 aaPredicted RBP22.1■■□□□ 1.13
PDLIM5-205ENST00000380180 RAD51AP2Q09MP3 1159 aa22.1■■□□□ 1.13
PDLIM5-205ENST00000380180 VGLL4Q14135 290 aa22.1■■□□□ 1.13
PDLIM5-205ENST00000380180 KRT26Q7Z3Y9 468 aa22.1■■□□□ 1.13
PDLIM5-205ENST00000380180 CCDC65Q8IXS2 484 aa22.1■■□□□ 1.13
PDLIM5-205ENST00000380180 TC2NQ8N9U0 490 aa22.1■■□□□ 1.13
PDLIM5-205ENST00000380180 GLIS3Q8NEA6 775 aa22.1■■□□□ 1.13
PDLIM5-205ENST00000380180 EEF2KMTQ96G04 330 aa22.1■■□□□ 1.13
PDLIM5-205ENST00000380180 SNCAIPQ9Y6H5 919 aa22.1■■□□□ 1.13
PDLIM5-205ENST00000380180 PAPPA2Q9BXP8 1791 aa22.1■■□□□ 1.13
PDLIM5-205ENST00000380180 IPO5O00410 1097 aaKnown RBP22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 LRRC41Q15345 812 aa22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 PCNX4Q63HM2 1172 aa22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 RNF207Q6ZRF8 634 aa22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 CCDC112Q8NEF3 446 aa22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 WDR11Q9BZH6 1224 aa22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 MAGEC2Q9UBF1 373 aaPredicted RBP22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 R3HCC1Q9Y3T6 440 aaKnown RBP22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 USP27XA6NNY8 438 aa22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 SLITRK3O94933 977 aa22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 KRT18P05783 430 aaKnown RBP22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 BCRP11274 1271 aa22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 CTTNQ14247 550 aaKnown RBP22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 FAM26FQ5R3K3 315 aa22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 NSMFQ6X4W1 530 aa22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 TUFT1Q9NNX1 390 aa22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 KCNH7Q9NS40 1196 aa22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 RNF146Q9NTX7 359 aa22.09■■□□□ 1.13
PDLIM5-205ENST00000380180 KIAA1217Q5T5P2 1943 aa22.08■■□□□ 1.13
PDLIM5-205ENST00000380180 MRPS9P82933 396 aaKnown RBP22.08■■□□□ 1.13
PDLIM5-205ENST00000380180 SNRNP48Q6IEG0 339 aaKnown RBP22.08■■□□□ 1.13
PDLIM5-205ENST00000380180 DPY19L2Q6NUT2 758 aa22.08■■□□□ 1.13
PDLIM5-205ENST00000380180 TPH2Q8IWU9 490 aa22.08■■□□□ 1.13
PDLIM5-205ENST00000380180 KCTD17Q8N5Z5 321 aa22.08■■□□□ 1.13
PDLIM5-205ENST00000380180 DYDC2Q96IM9 177 aa22.08■■□□□ 1.13
PDLIM5-205ENST00000380180 TEKT3Q9BXF9 490 aa22.08■■□□□ 1.13
PDLIM5-205ENST00000380180 UNC45AQ9H3U1 944 aa22.08■■□□□ 1.13
PDLIM5-205ENST00000380180 TBC1D7Q9P0N9 293 aa22.08■■□□□ 1.13
PDLIM5-205ENST00000380180 ZNF214Q9UL59 606 aaPredicted RBP22.08■■□□□ 1.13
PDLIM5-205ENST00000380180 PCDHA2Q9Y5H9 948 aa22.08■■□□□ 1.13
PDLIM5-205ENST00000380180 FRMPD4Q14CM0 1322 aa22.08■■□□□ 1.12
PDLIM5-205ENST00000380180 LOXHD1Q8IVV2 1947 aa22.08■■□□□ 1.12
PDLIM5-205ENST00000380180 PPP1R12BO60237 982 aaPredicted RBP22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 EIF2AK2P19525 551 aaKnown RBP22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 OAZ1P54368 228 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 GIT2Q14161 759 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 SH3D19Q5HYK7 790 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 B3GNT9Q6UX72 402 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 NIPA1Q7RTP0 329 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 CCAR2Q8N163 923 aaKnown RBP22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 RIT2Q99578 217 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 BHMT2Q9H2M3 363 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 KCND1Q9NSA2 647 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 UBIAD1Q9Y5Z9 338 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 FRMD3A2A2Y4 597 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 EYA4O95677 639 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 RBL2Q08999 1139 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 TMEM132BQ14DG7 1078 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 PGM5Q15124 567 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms