RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 SLC1A4P43007 532 aa7.97□□□□□ -1.13
TRIM6-202ENST00000380097 BYSLQ13895 437 aaKnown RBP7.97□□□□□ -1.13
TRIM6-202ENST00000380097 SLC9C1Q4G0N8 1177 aa7.97□□□□□ -1.13
TRIM6-202ENST00000380097 SPICE1Q8N0Z3 855 aa7.97□□□□□ -1.13
TRIM6-202ENST00000380097 B4GALNT2Q8NHY0 566 aa7.97□□□□□ -1.13
TRIM6-202ENST00000380097 CNNM1Q9NRU3 951 aa7.97□□□□□ -1.13
TRIM6-202ENST00000380097 RGL1Q9NZL6 768 aa7.97□□□□□ -1.13
TRIM6-202ENST00000380097 RPS6KL1Q9Y6S9 549 aa7.97□□□□□ -1.13
TRIM6-202ENST00000380097 MYH8P13535 1937 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 A0A1W2PQJ5 194 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 LRRC53A6NM62 1247 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 DCDC2CA8MYV0 355 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 NBPF26B4DH59 902 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 F8W031 263 aaPredicted RBP7.96□□□□□ -1.13
TRIM6-202ENST00000380097 RGS16O15492 202 aaPredicted RBP7.96□□□□□ -1.13
TRIM6-202ENST00000380097 ASAP2O43150 1006 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 UBOX5O94941 541 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 PAEPP09466 180 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 NLRP5P59047 1200 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 ERVK-9P63128 1117 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 ARID5AQ03989 594 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 PDE4DQ08499 809 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 SCARF1Q14162 830 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 ERMARDQ5T6L9 678 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 PIK3AP1Q6ZUJ8 805 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 LRRC34Q8IZ02 419 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 NBPF15Q8N660 670 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 USP38Q8NB14 1042 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 PROCA1Q8NCQ7 364 aaPredicted RBP7.96□□□□□ -1.13
TRIM6-202ENST00000380097 LPIN2Q92539 896 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 DHTKD1Q96HY7 919 aaPredicted RBP7.96□□□□□ -1.13
TRIM6-202ENST00000380097 AP1M1Q9BXS5 423 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 TRIM7Q9C029 511 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 DPH5Q9H2P9 285 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 VCXQ9H320 206 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 SLC12A4Q9UP95 1085 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 UTP11Q9Y3A2 253 aaKnown RBP7.96□□□□□ -1.13
TRIM6-202ENST00000380097 PCDHGC5Q9Y5F6 944 aa7.96□□□□□ -1.13
TRIM6-202ENST00000380097 SRCAPQ6ZRS2 3230 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 FLOT1O75955 427 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 LINGO3P0C6S8 592 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 EIF3BP55884 814 aaKnown RBP7.96□□□□□ -1.14
TRIM6-202ENST00000380097 KIAA0753Q2KHM9 967 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 PDXDC2PQ6P474 469 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 ZNF654Q8IZM8 581 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 GBP7Q8N8V2 638 aaPredicted RBP7.96□□□□□ -1.14
TRIM6-202ENST00000380097 P2RX5Q93086 422 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 NACAP1Q9BZK3 213 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 PPP1R12CQ9BZL4 782 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 TTYH3Q9C0H2 523 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 NLRC4Q9NPP4 1024 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 CHCHD3Q9NX63 227 aaKnown RBP7.96□□□□□ -1.14
TRIM6-202ENST00000380097 TRMT112Q9UI30 125 aaKnown RBP7.96□□□□□ -1.14
TRIM6-202ENST00000380097 KRIT1O00522 736 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 DAPK3O43293 454 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 SUN1O94901 812 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 MSH2P43246 934 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 MRPS35P82673 323 aaKnown RBP7.96□□□□□ -1.14
TRIM6-202ENST00000380097 CUL3Q13618 768 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 PTPROQ16827 1216 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 TSNAXIP1Q2TAA8 658 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 FIGNQ5HY92 759 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 AKNAD1Q5T1N1 836 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 KIF6Q6ZMV9 814 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 STAG2Q8N3U4 1231 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 MARCH10Q8NA82 808 aaPredicted RBP7.96□□□□□ -1.14
TRIM6-202ENST00000380097 KLHL23Q8NBE8 558 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 DRAXINQ8NBI3 349 aaPredicted RBP7.96□□□□□ -1.14
TRIM6-202ENST00000380097 NKX2-3Q8TAU0 364 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 EZH1Q92800 747 aaPredicted RBP7.96□□□□□ -1.14
TRIM6-202ENST00000380097 CNKSR1Q969H4 720 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 PRMT1Q99873 361 aaKnown RBP7.96□□□□□ -1.14
TRIM6-202ENST00000380097 MOV10L1Q9BXT6 1211 aaKnown RBP7.96□□□□□ -1.14
TRIM6-202ENST00000380097 RNF26Q9BY78 433 aaPredicted RBP7.96□□□□□ -1.14
TRIM6-202ENST00000380097 ABCF3Q9NUQ8 709 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 SALL4Q9UJQ4 1053 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 NFAT5O94916 1531 aa7.96□□□□□ -1.14
TRIM6-202ENST00000380097 MARF1Q9Y4F3 1742 aaKnown RBP7.95□□□□□ -1.14
TRIM6-202ENST00000380097 N4BP2Q86UW6 1770 aaPredicted RBP7.95□□□□□ -1.14
TRIM6-202ENST00000380097 ZNF532Q9HCE3 1301 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 DPPA5A6NC42 116 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 CCDC169A6NNP5 214 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 SART1O43290 800 aaKnown RBP7.95□□□□□ -1.14
TRIM6-202ENST00000380097 ECEL1O95672 775 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 CCNE1P24864 410 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 PDE6CP51160 858 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 ZNF131P52739 623 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 ASIC1P78348 528 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 ATP2C1P98194 919 aaPredicted RBP7.95□□□□□ -1.14
TRIM6-202ENST00000380097 TCIRG1Q13488 830 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 UAP1Q16222 522 aaPredicted RBP7.95□□□□□ -1.14
TRIM6-202ENST00000380097 SLC4A8Q2Y0W8 1093 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 EARS2Q5JPH6 523 aaKnown RBP7.95□□□□□ -1.14
TRIM6-202ENST00000380097 ERGIC2Q96RQ1 377 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 MTRQ99707 1265 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 DDX47Q9H0S4 455 aaKnown RBP7.95□□□□□ -1.14
TRIM6-202ENST00000380097 RAB17Q9H0T7 212 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 ZBTB1Q9Y2K1 713 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 MRC1P22897 1456 aa7.95□□□□□ -1.14
TRIM6-202ENST00000380097 DCCP43146 1447 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms