RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 GRAMD1AQ96CP6 724 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 ZMYND12Q9H0C1 365 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 DIS3Q9Y2L1 958 aaKnown RBP7.92□□□□□ -1.14
DDX58-202ENST00000379883 RIMS1Q86UR5 1692 aaKnown RBP7.92□□□□□ -1.14
DDX58-202ENST00000379883 NALCNQ8IZF0 1738 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 ATP5J2-PTCD1G3V325 749 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 PRPF3O43395 683 aaKnown RBP7.92□□□□□ -1.14
DDX58-202ENST00000379883 PTCD1O75127 700 aaKnown RBP7.92□□□□□ -1.14
DDX58-202ENST00000379883 FTCDO95954 541 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 SKIV2L2P42285 1042 aaKnown RBP7.92□□□□□ -1.14
DDX58-202ENST00000379883 ZAP70P43403 619 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 RNASE9P60153 205 aaKnown RBP7.92□□□□□ -1.14
DDX58-202ENST00000379883 ASIC1P78348 528 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 MEI1Q5TIA1 1274 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 TMEM154Q6P9G4 183 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 ATG9AQ7Z3C6 839 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 COL23A1Q86Y22 540 aaPredicted RBP7.92□□□□□ -1.14
DDX58-202ENST00000379883 LRRC34Q8IZ02 419 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 GIMAP8Q8ND71 665 aaPredicted RBP7.92□□□□□ -1.14
DDX58-202ENST00000379883 OR2W6PQ8NHA6 318 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 ACTRT1Q8TDG2 376 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 ESR2Q92731 530 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 PGM2Q96G03 612 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.92□□□□□ -1.14
DDX58-202ENST00000379883 A0A087X0B3 334 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 ADD2P35612 726 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 VSIG1Q86XK7 387 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 OXER1Q8TDS5 423 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 RUNDC3BQ96NL0 473 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 FAM192AQ9GZU8 254 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 DISC1Q9NRI5 854 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 EHD2Q9NZN4 543 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 STOML1Q9UBI4 398 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 SPEF2Q9C093 1822 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 NID2Q14112 1375 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 ATP6V1C1P21283 382 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 RAD23BP54727 409 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 CTDSPL2Q05D32 466 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 PDXDC1Q6P996 788 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.91□□□□□ -1.14
DDX58-202ENST00000379883 LRRC53A6NM62 1247 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 ASIC2Q16515 512 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 IRGCQ6NXR0 463 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 ZNF790Q6PG37 636 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 ZSCAN29Q8IWY8 852 aaPredicted RBP7.91□□□□□ -1.14
DDX58-202ENST00000379883 CFAP61Q8NHU2 1237 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 ZSWIM5Q9P217 1185 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 ARHGAP20Q9P2F6 1191 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 ATP8A1Q9Y2Q0 1164 aa7.91□□□□□ -1.14
DDX58-202ENST00000379883 BZW2Q9Y6E2 419 aaKnown RBP7.91□□□□□ -1.14
DDX58-202ENST00000379883 F8VZ95 297 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 PDLIM1O00151 329 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 BACH1O14867 736 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 UBOX5O94941 541 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 LINGO3P0C6S8 592 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 IMPDH2P12268 514 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 GUCY1A2P33402 732 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 NCALDP61601 193 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 MKRN4PQ13434 485 aaPredicted RBP7.9□□□□□ -1.14
DDX58-202ENST00000379883 MAP7Q14244 749 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 HHATQ5VTY9 493 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 TTI2Q6NXR4 508 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 ATXN2LQ8WWM7 1075 aaKnown RBP7.9□□□□□ -1.14
DDX58-202ENST00000379883 DNAJC9Q8WXX5 260 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 TLCD1Q96CP7 247 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 PHF20Q9BVI0 1012 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 RXFP1Q9HBX9 757 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 FAM217BQ9NTX9 383 aaPredicted RBP7.9□□□□□ -1.14
DDX58-202ENST00000379883 CEP72Q9P209 647 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 PDP2Q9P2J9 529 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 PNMA2Q9UL42 364 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 RPL26L1Q9UNX3 145 aaKnown RBP7.9□□□□□ -1.14
DDX58-202ENST00000379883 C2CD2Q9Y426 696 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 DIP2CQ9Y2E4 1556 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 CCDC194A0A1B0GVG4 234 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 LAD1O00515 517 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 CETN3O15182 167 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 BAG3O95817 575 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 ACADSP16219 412 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 INHBEP58166 350 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 ERVK-9P63128 1117 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 GFPT1Q06210 699 aaPredicted RBP7.9□□□□□ -1.14
DDX58-202ENST00000379883 BTNL9Q6UXG8 535 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 PEX26Q7Z412 305 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 TMC3Q7Z5M5 1100 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 RNF168Q8IYW5 571 aaPredicted RBP7.9□□□□□ -1.14
DDX58-202ENST00000379883 CALML4Q96GE6 196 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 MIS12Q9H081 205 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 CCDC134Q9H6E4 229 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 NKIRAS1Q9NYS0 192 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 NFAT5O94916 1531 aa7.9□□□□□ -1.14
DDX58-202ENST00000379883 H0YGN5 161 aa7.9□□□□□ -1.15
DDX58-202ENST00000379883 H7C1W4 665 aa7.9□□□□□ -1.15
DDX58-202ENST00000379883 CSB-PGBD3P0DP91 1061 aa7.9□□□□□ -1.15
DDX58-202ENST00000379883 DESP17661 470 aa7.9□□□□□ -1.15
DDX58-202ENST00000379883 CALB2P22676 271 aa7.9□□□□□ -1.15
DDX58-202ENST00000379883 SLC1A4P43007 532 aa7.9□□□□□ -1.15
DDX58-202ENST00000379883 PMS2P54278 862 aa7.9□□□□□ -1.15
DDX58-202ENST00000379883 KLHL30Q0D2K2 578 aa7.9□□□□□ -1.15
DDX58-202ENST00000379883 SNX1Q13596 522 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms