RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 ATP8A1Q9Y2Q0 1164 aa12.46□□□□□ -0.41
SMAD9-202ENST00000379826 NPHP3-ACAD11A0A0J9YXS1 232 aa12.46□□□□□ -0.41
SMAD9-202ENST00000379826 DDX39AO00148 427 aaKnown RBP12.46□□□□□ -0.41
SMAD9-202ENST00000379826 CYP4A11Q02928 519 aa12.46□□□□□ -0.41
SMAD9-202ENST00000379826 LACRTQ9GZZ8 138 aa12.46□□□□□ -0.41
SMAD9-202ENST00000379826 TMOD4Q9NZQ9 345 aa12.46□□□□□ -0.41
SMAD9-202ENST00000379826 MTRF1LQ9UGC7 380 aaKnown RBP12.46□□□□□ -0.41
SMAD9-202ENST00000379826 MAP2K7O14733 419 aa12.46□□□□□ -0.41
SMAD9-202ENST00000379826 TCP10Q12799 353 aa12.46□□□□□ -0.41
SMAD9-202ENST00000379826 HAUS3Q68CZ6 603 aa12.46□□□□□ -0.41
SMAD9-202ENST00000379826 MMS22LQ6ZRQ5 1243 aa12.46□□□□□ -0.41
SMAD9-202ENST00000379826 BSDC1Q9NW68 430 aaPredicted RBP12.46□□□□□ -0.41
SMAD9-202ENST00000379826 KRT14P02533 472 aa12.46□□□□□ -0.42
SMAD9-202ENST00000379826 CLNS1AP54105 237 aaKnown RBP12.46□□□□□ -0.42
SMAD9-202ENST00000379826 E2F5Q15329 346 aa12.46□□□□□ -0.42
SMAD9-202ENST00000379826 DENND2CQ68D51 928 aa12.46□□□□□ -0.42
SMAD9-202ENST00000379826 STXBP4Q6ZWJ1 553 aa12.46□□□□□ -0.42
SMAD9-202ENST00000379826 FAM84BQ96KN1 310 aaPredicted RBP12.46□□□□□ -0.42
SMAD9-202ENST00000379826 DNAJC7Q99615 494 aa12.46□□□□□ -0.42
SMAD9-202ENST00000379826 NFAT5O94916 1531 aa12.46□□□□□ -0.42
SMAD9-202ENST00000379826 SETD1AO15047 1707 aaKnown RBP12.46□□□□□ -0.42
SMAD9-202ENST00000379826 RGPD2P0DJD1 1756 aa12.46□□□□□ -0.42
SMAD9-202ENST00000379826 KLRK1P26718 216 aa12.46□□□□□ -0.42
SMAD9-202ENST00000379826 PABPC4Q13310 644 aaKnown RBP eCLIP12.46□□□□□ -0.42
SMAD9-202ENST00000379826 SYCE1Q8N0S2 351 aa12.46□□□□□ -0.42
SMAD9-202ENST00000379826 ARMCX3Q9UH62 379 aaPredicted RBP12.46□□□□□ -0.42
SMAD9-202ENST00000379826 PTPN22Q9Y2R2 807 aa12.46□□□□□ -0.42
SMAD9-202ENST00000379826 RNF225M0QZC1 329 aaPredicted RBP12.45□□□□□ -0.42
SMAD9-202ENST00000379826 BACH1O14867 736 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 SNAP25P60880 206 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 GRM4Q14833 912 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 LLGL1Q15334 1064 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 MCTP2Q6DN12 878 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 BARHL2Q9NY43 387 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 RAB21Q9UL25 225 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 EXOC3L4Q17RC7 722 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 ANKRD42Q8N9B4 389 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 NT5C3AQ9H0P0 336 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 SRP68Q9UHB9 627 aaKnown RBP12.45□□□□□ -0.42
SMAD9-202ENST00000379826 FAM205AQ6ZU69 1335 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 SPOPO43791 374 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 TDP2O95551 362 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 MFSD14BQ5SR56 506 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 HOOK3Q86VS8 718 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 RAD54LQ92698 747 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 CAPN6Q9Y6Q1 641 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 GFPT2O94808 682 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 RHOBTB3O94955 611 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 DHX9Q08211 1270 aaKnown RBP12.45□□□□□ -0.42
SMAD9-202ENST00000379826 UNC13DQ70J99 1090 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 GSTA5Q7RTV2 222 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 ARMC9Q7Z3E5 817 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 TPH2Q8IWU9 490 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 OR2W6PQ8NHA6 318 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 TRIM9Q9C026 710 aa12.45□□□□□ -0.42
SMAD9-202ENST00000379826 E9PMD0 336 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 EIF3HO15372 352 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMAD9-202ENST00000379826 KCNB1Q14721 858 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 SEC23AQ15436 765 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 HS2ST1Q7LGA3 356 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 HDAC7Q8WUI4 952 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 STK38LQ9Y2H1 464 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 RIC1Q4ADV7 1423 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 KDM3AQ9Y4C1 1321 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 FAM237AA0A1B0GTK4 181 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 PRPHP41219 470 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 IFNAR2P48551 515 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 CDK8P49336 464 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 IRAK1P51617 712 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 WDR93Q6P2C0 686 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 PDXDC1Q6P996 788 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 CCDC105Q8IYK2 499 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 NSUN4Q96CB9 384 aaKnown RBP12.44□□□□□ -0.42
SMAD9-202ENST00000379826 ZIM3Q96PE6 472 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 GGA1Q9UJY5 639 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 RPSAP08865 295 aaKnown RBP12.44□□□□□ -0.42
SMAD9-202ENST00000379826 CORO7P57737 925 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 SNCBQ16143 134 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 GIMAP8Q8ND71 665 aaPredicted RBP12.44□□□□□ -0.42
SMAD9-202ENST00000379826 STMN4Q9H169 189 aaPredicted RBP12.44□□□□□ -0.42
SMAD9-202ENST00000379826 EHD4Q9H223 541 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 FANCGO15287 622 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 SLCO1A2P46721 670 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 FKBP3Q00688 224 aaKnown RBP12.44□□□□□ -0.42
SMAD9-202ENST00000379826 TROAPQ12815 778 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 COASYQ13057 564 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 KCTD19Q17RG1 926 aaPredicted RBP12.44□□□□□ -0.42
SMAD9-202ENST00000379826 ZNF34Q8IZ26 560 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 MTA3Q9BTC8 594 aa12.44□□□□□ -0.42
SMAD9-202ENST00000379826 RGS16O15492 202 aaPredicted RBP12.43□□□□□ -0.42
SMAD9-202ENST00000379826 SCNN1DP51172 638 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 ADCY1Q08828 1119 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 CALCOCO2Q13137 446 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 NLRP14Q86W24 1093 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 EMILIN3Q9NT22 766 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 CEP72Q9P209 647 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 FAM83BQ5T0W9 1011 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 PACS2Q86VP3 889 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 SPATS2Q86XZ4 545 aaKnown RBP12.43□□□□□ -0.42
SMAD9-202ENST00000379826 TTLL6Q8N841 843 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms