RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 COX16Q9P0S2 106 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 APC2O95996 2303 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 HNRNPDLO14979 420 aaKnown RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 ZC3H11AO75152 810 aaKnown RBP eCLIP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 URODP06132 367 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 ERVK-9P63128 1117 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 ERVK-24P63145 666 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 HDLBPQ00341 1268 aaKnown RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 TRIM28Q13263 835 aaKnown RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 ERCC6LQ2NKX8 1250 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 HERC4Q5GLZ8 1057 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 AXDND1Q5T1B0 1012 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 KCNV1Q6PIU1 500 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 PRR23CQ6ZRP0 262 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 HOOK3Q86VS8 718 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 PPFIBP1Q86W92 1011 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 ZNF397Q8NF99 534 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 GSDMBQ8TAX9 411 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 ACSF2Q96CM8 615 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 CPVLQ9H3G5 476 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 PIH1D3Q9NQM4 214 aaKnown RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 FBXO28Q9NVF7 368 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 TBC1D7Q9P0N9 293 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 VPS54Q9P1Q0 977 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 HESX1Q9UBX0 185 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 GDAQ9Y2T3 454 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 SMTNL1A8MU46 457 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 EXOC3O60645 756 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 ZNF18P17022 549 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 KLRC2P26717 231 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 KLRK1P26718 216 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 RECQLP46063 649 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 SCRN1Q12765 414 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 FBXO16Q8IX29 292 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 FLCNQ8NFG4 579 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 U2AF1L4Q8WU68 220 aaKnown RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 SNX19Q92543 992 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 USP28Q96RU2 1077 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 SPATC1LQ9H0A9 340 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 RASSF4Q9H2L5 321 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 LARSQ9P2J5 1176 aaKnown RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 RICTORQ6R327 1708 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 NCAPD2Q15021 1401 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 DLG5Q8TDM6 1919 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 FOXN1O15353 648 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 AP5Z1O43299 807 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 TM4SF1P30408 202 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 NNMTP40261 264 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 TERF2Q15554 542 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 CYFIP1Q7L576 1253 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 FIBCD1Q8N539 461 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 KIAA1524Q8TCG1 905 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 CEP95Q96GE4 821 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.2□□□□□ -1.269e-6■■□□□ 13.2
NEDD9-202ENST00000379446 SUDS3Q9H7L9 328 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 MAP3K20Q9NYL2 800 aaKnown RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 STIM2Q9P246 746 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 ZC3H4Q9UPT8 1303 aaKnown RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 BTBD19C9JJ37 291 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 KPNA1P52294 538 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 GYS2P54840 703 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 ARID5BQ14865 1188 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 RGL4Q8IZJ4 473 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 PIAS4Q8N2W9 510 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-202ENST00000379446 CHST13Q8NET6 341 aa7.2□□□□□ -1.26
NEDD9-202ENST00000379446 SHTN1A0MZ66 631 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 TBKBP1A7MCY6 615 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 GCNT3O95395 438 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 DEXIO95424 95 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 ACRP10323 421 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 PTPREP23469 700 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 KRT9P35527 623 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 PHKA2P46019 1235 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 TFAMQ00059 246 aaKnown RBP7.19□□□□□ -1.26
NEDD9-202ENST00000379446 GOLGA8FQ08AF8 430 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 GOLGA8DPQ0D2H9 430 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 ST3GAL1Q11201 340 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 LLGL2Q6P1M3 1020 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 SYT10Q6XYQ8 523 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 C11orf57Q6ZUT1 292 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-202ENST00000379446 RABEP2Q9H5N1 569 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 ITSN1Q15811 1721 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 TNNC1P63316 161 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 MTX1Q13505 466 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 MCM6Q14566 821 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 E2F4Q16254 413 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 SWSAP1Q6NVH7 229 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 ACER1Q8TDN7 264 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 PSPC1Q8WXF1 523 aaKnown RBP7.19□□□□□ -1.26
NEDD9-202ENST00000379446 MRPS27Q92552 414 aaKnown RBP7.19□□□□□ -1.26
NEDD9-202ENST00000379446 FAM149B1Q96BN6 582 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 APBA2Q99767 749 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 MTG1Q9BT17 334 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-202ENST00000379446 KCNF1Q9H3M0 494 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 ZNF302Q9NR11 478 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 IPO11Q9UI26 975 aaKnown RBP7.19□□□□□ -1.26
NEDD9-202ENST00000379446 ABCB11O95342 1321 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 MROH7Q68CQ1 1323 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 PI4K2BG5E9Z4 385 aa7.19□□□□□ -1.26
NEDD9-202ENST00000379446 NDUFB10O96000 172 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms