RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 DCAF4Q8WV16 495 aa11.99□□□□□ -0.49
NEDD9-201ENST00000379433 FAM210AQ96ND0 272 aa11.99□□□□□ -0.49
NEDD9-201ENST00000379433 MTMR9Q96QG7 549 aa11.99□□□□□ -0.49
NEDD9-201ENST00000379433 RAVER2Q9HCJ3 691 aaKnown RBP11.99□□□□□ -0.49
NEDD9-201ENST00000379433 RWDD2AQ9UIY3 292 aa11.99□□□□□ -0.49
NEDD9-201ENST00000379433 ZNF215Q9UL58 517 aaPredicted RBP11.99□□□□□ -0.49
NEDD9-201ENST00000379433 CEP350Q5VT06 3117 aa11.99□□□□□ -0.49
NEDD9-201ENST00000379433 CCDC66A2RUB6 948 aa11.99□□□□□ -0.49
NEDD9-201ENST00000379433 ENTPD3O75355 529 aa11.99□□□□□ -0.49
NEDD9-201ENST00000379433 ARID5AQ03989 594 aa11.99□□□□□ -0.49
NEDD9-201ENST00000379433 TBC1D8BQ0IIM8 1120 aa11.99□□□□□ -0.49
NEDD9-201ENST00000379433 KIAA0895Q8NCT3 520 aa11.99□□□□□ -0.49
NEDD9-201ENST00000379433 LRRN4CLQ8ND94 238 aa11.99□□□□□ -0.49
NEDD9-201ENST00000379433 SLF1Q9BQI6 1058 aa11.99□□□□□ -0.49
NEDD9-201ENST00000379433 NOC4LQ9BVI4 516 aaKnown RBP11.99□□□□□ -0.49
NEDD9-201ENST00000379433 IKZF4Q9H2S9 585 aa11.99□□□□□ -0.49
NEDD9-201ENST00000379433 GABBR1Q9UBS5 961 aa11.99□□□□□ -0.49
NEDD9-201ENST00000379433 CNOT7Q9UIV1 285 aaKnown RBP11.99□□□□□ -0.49
NEDD9-201ENST00000379433 LAD1O00515 517 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 MED24O75448 989 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 HDLBPQ00341 1268 aaKnown RBP11.98□□□□□ -0.49
NEDD9-201ENST00000379433 SPP2Q13103 211 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 SLC24A3Q9HC58 644 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 GOPCQ9HD26 462 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 PPP2R2CQ9Y2T4 447 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 MYH8P13535 1937 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 ABCB11O95342 1321 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 A0A1B0GTH6 734 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 TRAF5O00463 557 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 ABL1P00519 1130 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 TFRCP02786 760 aaKnown RBP11.98□□□□□ -0.49
NEDD9-201ENST00000379433 MYCLP12524 364 aaPredicted RBP11.98□□□□□ -0.49
NEDD9-201ENST00000379433 CNOT6LQ96LI5 555 aaKnown RBP11.98□□□□□ -0.49
NEDD9-201ENST00000379433 AK8Q96MA6 479 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 PYM1Q9BRP8 204 aaKnown RBP11.98□□□□□ -0.49
NEDD9-201ENST00000379433 TUBGCP2Q9BSJ2 902 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 DONSONQ9NYP3 566 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 CCPG1Q9ULG6 757 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 SPDYE4A6NLX3 237 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 NFKBIEO00221 500 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 GYPCP04921 128 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 PRPHP41219 470 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 MTMR2Q13614 643 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 SPDYE2Q495Y8 402 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 KSR1Q8IVT5 923 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 CHP1Q99653 195 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 EPC1Q9H2F5 836 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 BHMT2Q9H2M3 363 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 RMI1Q9H9A7 625 aa11.98□□□□□ -0.49
NEDD9-201ENST00000379433 ESYT2A0FGR8 921 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 APBA1Q02410 837 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 HOOK2Q96ED9 719 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 PRIMPOLQ96LW4 560 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 MAF1Q9H063 256 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 DEFB129Q9H1M3 183 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 PANK4Q9NVE7 773 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 HACL1Q9UJ83 578 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 MYH4Q9Y623 1939 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 RSPH10B2B2RC85 870 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 H0YHG0 523 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 PLA2G4BP0C869 781 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 RSPH10BP0C881 870 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 ABCD1P33897 745 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 SARNPP82979 210 aaKnown RBP11.97□□□□□ -0.49
NEDD9-201ENST00000379433 SYCP1Q15431 976 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 IRF2BP1Q8IU81 584 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 SMCR8Q8TEV9 937 aaPredicted RBP11.97□□□□□ -0.49
NEDD9-201ENST00000379433 RAD54LQ92698 747 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 P2RX5Q93086 422 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 SPOCK3Q9BQ16 436 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 AGPAT5Q9NUQ2 364 aa11.97□□□□□ -0.49
NEDD9-201ENST00000379433 NFIBO00712 420 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 EIF2AK2P19525 551 aaKnown RBP11.96□□□□□ -0.49
NEDD9-201ENST00000379433 CAP2P40123 477 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 TSR1Q2NL82 804 aaKnown RBP11.96□□□□□ -0.49
NEDD9-201ENST00000379433 ANGEL2Q5VTE6 544 aaKnown RBP11.96□□□□□ -0.49
NEDD9-201ENST00000379433 CDKAL1Q5VV42 579 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 RAD9BQ6WBX8 426 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 GIMAP8Q8ND71 665 aaPredicted RBP11.96□□□□□ -0.49
NEDD9-201ENST00000379433 CTAGE1Q96RT6 745 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 WDR24Q96S15 920 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 HERC5Q9UII4 1024 aaKnown RBP11.96□□□□□ -0.49
NEDD9-201ENST00000379433 COL4A5P29400 1685 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 CNTNAP1P78357 1384 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 NOVP48745 357 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 TCERG1LQ5VWI1 586 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 CNNM4Q6P4Q7 775 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 APTXQ7Z2E3 356 aaKnown RBP11.96□□□□□ -0.49
NEDD9-201ENST00000379433 LDHDQ86WU2 507 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 CATSPER3Q86XQ3 398 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 MKL1Q969V6 931 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 GMLQ99445 158 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 SEMA6BQ9H3T3 888 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 MRPL44Q9H9J2 332 aaKnown RBP11.96□□□□□ -0.49
NEDD9-201ENST00000379433 WDR70Q9NW82 654 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 TRIM10Q9UDY6 481 aa11.96□□□□□ -0.49
NEDD9-201ENST00000379433 PLIN4Q96Q06 1357 aa11.96□□□□□ -0.5
NEDD9-201ENST00000379433 TTC26A0AVF1 554 aa11.96□□□□□ -0.5
NEDD9-201ENST00000379433 OPLAHO14841 1288 aa11.96□□□□□ -0.5
NEDD9-201ENST00000379433 CAND2O75155 1236 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms