RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 KRT26Q7Z3Y9 468 aa17.17■□□□□ 0.34
RAB3IP-204ENST00000378815 GPBP1Q86WP2 473 aa17.17■□□□□ 0.34
RAB3IP-204ENST00000378815 RBM46Q8TBY0 533 aaKnown RBP17.17■□□□□ 0.34
RAB3IP-204ENST00000378815 NOC3LQ8WTT2 800 aaKnown RBP17.17■□□□□ 0.34
RAB3IP-204ENST00000378815 ZFP91Q96JP5 570 aaPredicted RBP17.17■□□□□ 0.34
RAB3IP-204ENST00000378815 HSD17B14Q9BPX1 270 aa17.17■□□□□ 0.34
RAB3IP-204ENST00000378815 ZNF577Q9BSK1 485 aa17.17■□□□□ 0.34
RAB3IP-204ENST00000378815 DNM3Q9UQ16 869 aa17.17■□□□□ 0.34
RAB3IP-204ENST00000378815 RIPK3Q9Y572 518 aa17.17■□□□□ 0.34
RAB3IP-204ENST00000378815 PSMC6P62333 389 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 FILIP1LQ4L180 1135 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 DPY19L2Q6NUT2 758 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 B3GNT9Q6UX72 402 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 GUF1Q8N442 669 aaKnown RBP17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 IL31RAQ8NI17 732 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 TRIM47Q96LD4 638 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 PAPPA2Q9BXP8 1791 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 ATP2A1O14983 1001 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 GAS7O60861 476 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 COASYQ13057 564 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 ARSHQ5FYA8 562 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 ANKRD40Q6AI12 368 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 CENPPQ6IPU0 288 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 SLC30A10Q6XR72 485 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 SYT2Q8N9I0 419 aaPredicted RBP17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 ANKRD20A12PQ8NF67 263 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 RIT2Q99578 217 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 WDR11Q9BZH6 1224 aa17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 ZNF214Q9UL59 606 aaPredicted RBP17.16■□□□□ 0.34
RAB3IP-204ENST00000378815 IPO5O00410 1097 aaKnown RBP17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 PPP1R12BO60237 982 aaPredicted RBP17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 COPB1P53618 953 aaKnown RBP17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 CYP4A11Q02928 519 aa17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 USP50Q70EL3 339 aaPredicted RBP17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 TAAR1Q96RJ0 339 aa17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 SRRTQ9BXP5 876 aaKnown RBP17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 TUFT1Q9NNX1 390 aa17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 RNF146Q9NTX7 359 aa17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 PANK4Q9NVE7 773 aa17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 RGL1Q9NZL6 768 aa17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 UBIAD1Q9Y5Z9 338 aa17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 MYPNQ86TC9 1320 aa17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 FRMD3A2A2Y4 597 aa17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 EEF1GP26641 437 aaKnown RBP17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 MRPS9P82933 396 aaKnown RBP17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 RNF207Q6ZRF8 634 aa17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 CSGALNACT2Q8N6G5 542 aa17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 SEMA6BQ9H3T3 888 aa17.15■□□□□ 0.34
RAB3IP-204ENST00000378815 PABPC4Q13310 644 aaKnown RBP eCLIP17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 TMEM132BQ14DG7 1078 aa17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 SNRNP48Q6IEG0 339 aaKnown RBP17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 CCDC65Q8IXS2 484 aa17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 ZC3H15Q8WU90 426 aaKnown RBP17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 TMX1Q9H3N1 280 aa17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 KCNH7Q9NS40 1196 aa17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 CSADQ9Y600 493 aa17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 RBBP6Q7Z6E9 1792 aaKnown RBP17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 NPHP3-ACAD11A0A0J9YXS1 232 aa17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 N4BP3O15049 544 aa17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 SLITRK3O94933 977 aa17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 PGM5Q15124 567 aa17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 TEKT3Q9BXF9 490 aa17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 UNC45AQ9H3U1 944 aa17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 HOXC10Q9NYD6 342 aa17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 TAB2Q9NYJ8 693 aa17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 PCDHA2Q9Y5H9 948 aa17.14■□□□□ 0.33
RAB3IP-204ENST00000378815 SPDYE16A6NNV3 312 aaPredicted RBP17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 CHMP2AO43633 222 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 EYA4O95677 639 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 MUTP22033 750 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 EPHX2P34913 555 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 TKFCQ3LXA3 575 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 FAM26FQ5R3K3 315 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 FOXR2Q6PJQ5 311 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 NSMFQ6X4W1 530 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 CCDC112Q8NEF3 446 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 JADE2Q9NQC1 790 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 PXMP2Q9NR77 195 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 KCND1Q9NSA2 647 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 EIF2AK2P19525 551 aaKnown RBP17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 KCNJ6P48051 423 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 IREB2P48200 963 aaKnown RBP17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 BAATQ14032 418 aaPredicted RBP17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 GLIS3Q8NEA6 775 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 DYDC2Q96IM9 177 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 RMDN3Q96TC7 470 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 PDCD2LQ9BRP1 358 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 TEX13BQ9BXU2 312 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 VPS16Q9H269 839 aa17.13■□□□□ 0.33
RAB3IP-204ENST00000378815 ITIH6Q6UXX5 1313 aa17.12■□□□□ 0.33
RAB3IP-204ENST00000378815 WDR90Q96KV7 1748 aa17.12■□□□□ 0.33
RAB3IP-204ENST00000378815 GIT2Q14161 759 aa17.12■□□□□ 0.33
RAB3IP-204ENST00000378815 CTTNQ14247 550 aaKnown RBP17.12■□□□□ 0.33
RAB3IP-204ENST00000378815 EPHA7Q15375 998 aa17.12■□□□□ 0.33
RAB3IP-204ENST00000378815 TC2NQ8N9U0 490 aa17.12■□□□□ 0.33
RAB3IP-204ENST00000378815 BHMT2Q9H2M3 363 aa17.12■□□□□ 0.33
RAB3IP-204ENST00000378815 AGO4Q9HCK5 861 aaKnown RBP17.12■□□□□ 0.33
RAB3IP-204ENST00000378815 SRCAPQ6ZRS2 3230 aa17.12■□□□□ 0.33
RAB3IP-204ENST00000378815 DHX15O43143 795 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms