RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SMARCA1P28370 1054 aa18.3■□□□□ 0.52
PCDHA1-201ENST00000378133 GPSM2P81274 684 aa18.3■□□□□ 0.52
PCDHA1-201ENST00000378133 GUCY1A3Q02108 690 aa18.3■□□□□ 0.52
PCDHA1-201ENST00000378133 CFAP58Q5T655 872 aa18.3■□□□□ 0.52
PCDHA1-201ENST00000378133 RIOX1Q9H6W3 641 aa18.3■□□□□ 0.52
PCDHA1-201ENST00000378133 PVALEFA0A1B0GWK0 134 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 AKR1B10O60218 316 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 PDHBP11177 359 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 NAP1L1P55209 391 aaKnown RBP18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 DDR1Q08345 913 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 MAN2A1Q16706 1144 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 KDM7AQ6ZMT4 941 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 KRT27Q7Z3Y8 459 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 KCNK18Q7Z418 384 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 CCDC43Q96MW1 224 aaKnown RBP18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 STK17AQ9UEE5 414 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 LRRC53A6NM62 1247 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 TNFRSF8P28908 595 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 FXR2P51116 673 aaKnown RBP eCLIP18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 EIF6P56537 245 aaKnown RBP18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 RHBDL3P58872 404 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 TMEM266Q2M3C6 531 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 NAA35Q5VZE5 725 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 GUF1Q8N442 669 aaKnown RBP18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 CCDC155Q8N6L0 562 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 DDX12PQ92771 950 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 RBM12Q9NTZ6 932 aaKnown RBP18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 TAF1LQ8IZX4 1826 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 ESYT2A0FGR8 921 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 UFL1O94874 794 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 RFC4P35249 363 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 RNF187Q5TA31 235 aaPredicted RBP18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 EGFL6Q8IUX8 553 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 IFT20Q8IY31 132 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 IQCKQ8N0W5 287 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 ANKRD13CQ8N6S4 541 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 SNX29Q8TEQ0 813 aa18.29■□□□□ 0.52
PCDHA1-201ENST00000378133 COL24A1Q17RW2 1714 aa18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 TNRC6CQ9HCJ0 1690 aaKnown RBP18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 NCK2O43639 380 aa18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 CCDC84Q86UT8 332 aaPredicted RBP18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 LRRC47Q8N1G4 583 aaKnown RBP18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 RAD54LQ92698 747 aa18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 IQCDQ96DY2 449 aa18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 DDX60LQ5H9U9 1706 aaKnown RBP18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 ZNF233A6NK53 670 aa18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 ADCY7P51828 1080 aa18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 ORC2Q13416 577 aaPredicted RBP18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 GLE1Q53GS7 698 aaKnown RBP18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 MFSD14BQ5SR56 506 aa18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 YTHDF3Q7Z739 585 aaKnown RBP18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 ZNF473Q8WTR7 871 aaKnown RBP18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 IFT81Q8WYA0 676 aa18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 GJA10Q969M2 543 aa18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 GPCPD1Q9NPB8 672 aa18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 A1CFQ9NQ94 594 aaKnown RBP18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 NFU1Q9UMS0 254 aa18.28■□□□□ 0.52
PCDHA1-201ENST00000378133 FGFR1OPO95684 399 aaKnown RBP18.27■□□□□ 0.52
PCDHA1-201ENST00000378133 CARSP49589 748 aaKnown RBP18.27■□□□□ 0.52
PCDHA1-201ENST00000378133 ECM1Q16610 540 aa18.27■□□□□ 0.52
PCDHA1-201ENST00000378133 KRT79Q5XKE5 535 aa18.27■□□□□ 0.52
PCDHA1-201ENST00000378133 ZNF772Q68DY9 489 aaPredicted RBP18.27■□□□□ 0.52
PCDHA1-201ENST00000378133 CLEC10AQ8IUN9 316 aa18.27■□□□□ 0.52
PCDHA1-201ENST00000378133 CNBD1Q8NA66 436 aa18.27■□□□□ 0.52
PCDHA1-201ENST00000378133 TANGO6Q9C0B7 1094 aa18.27■□□□□ 0.52
PCDHA1-201ENST00000378133 DONSONQ9NYP3 566 aa18.27■□□□□ 0.52
PCDHA1-201ENST00000378133 SALL4Q9UJQ4 1053 aa18.27■□□□□ 0.52
PCDHA1-201ENST00000378133 CDK5RAP2Q96SN8 1893 aa18.27■□□□□ 0.52
PCDHA1-201ENST00000378133 FAM153BP0C7A2 387 aa18.27■□□□□ 0.51
PCDHA1-201ENST00000378133 NR1D1P20393 614 aa18.27■□□□□ 0.51
PCDHA1-201ENST00000378133 MAGEA1P43355 309 aa18.27■□□□□ 0.51
PCDHA1-201ENST00000378133 TNNI2P48788 182 aa18.27■□□□□ 0.51
PCDHA1-201ENST00000378133 APBA1Q02410 837 aa18.27■□□□□ 0.51
PCDHA1-201ENST00000378133 FAM153CQ494X1 144 aa18.27■□□□□ 0.51
PCDHA1-201ENST00000378133 LRRC55Q6ZSA7 311 aa18.27■□□□□ 0.51
PCDHA1-201ENST00000378133 RAB34Q9BZG1 259 aa18.27■□□□□ 0.51
PCDHA1-201ENST00000378133 FAM153AQ9UHL3 310 aa18.27■□□□□ 0.51
PCDHA1-201ENST00000378133 PPP1R37O75864 691 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 GLI1P08151 1106 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 PLCG2P16885 1265 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 LRRC63Q05C16 580 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 PDIA5Q14554 519 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 RPAINQ86UA6 219 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 BAP1Q92560 729 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 CCT8L2Q96SF2 557 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 PAGR1Q9BTK6 254 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 EPB41L5Q9HCM4 733 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 MTMR4Q9NYA4 1195 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 LCA5LO95447 670 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 RDXP35241 583 aaKnown RBP18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 NOVP48745 357 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 SEC24CP53992 1094 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 GFPT1Q06210 699 aaPredicted RBP18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 PTGISQ16647 500 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 UBE2SQ16763 222 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 CFAP221Q4G0U5 840 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 CACNA2D4Q7Z3S7 1137 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 MS4A14Q96JA4 679 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 CD248Q9HCU0 757 aa18.26■□□□□ 0.51
PCDHA1-201ENST00000378133 GUCY2DQ02846 1103 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms