RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ZNF215Q9UL58 517 aaPredicted RBP15.93■□□□□ 0.14
TCOF1-202ENST00000377797 MKRN3Q13064 507 aaKnown RBP15.92■□□□□ 0.14
TCOF1-202ENST00000377797 PRAMEF18Q5VWM3 479 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 HSF2BPO75031 334 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 N4BP1O75113 896 aaKnown RBP15.92■□□□□ 0.14
TCOF1-202ENST00000377797 ABCB4P21439 1286 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 TM4SF1P30408 202 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 GRIK5Q16478 980 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 PCIF1Q9H4Z3 704 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 KMT5AQ9NQR1 393 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 RASAL2Q9UJF2 1139 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 IPO5O00410 1097 aaKnown RBP15.92■□□□□ 0.14
TCOF1-202ENST00000377797 CD19P15391 556 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 PRELPP51888 382 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 MTERF2Q49AM1 385 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 NOD1Q9Y239 953 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 SAR1BQ9Y6B6 198 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 SETD1AO15047 1707 aaKnown RBP15.92■□□□□ 0.14
TCOF1-202ENST00000377797 DDTLA6NHG4 134 aaPredicted RBP15.92■□□□□ 0.14
TCOF1-202ENST00000377797 AFPP02771 609 aaKnown RBP15.92■□□□□ 0.14
TCOF1-202ENST00000377797 IGBP1P78318 339 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 MTMR2Q13614 643 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 MIS18BP1Q6P0N0 1132 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 PDXDC2PQ6P474 469 aa15.92■□□□□ 0.14
TCOF1-202ENST00000377797 DHX37Q8IY37 1157 aaKnown RBP15.92■□□□□ 0.14
TCOF1-202ENST00000377797 RPAP3Q9H6T3 665 aaPredicted RBP15.92■□□□□ 0.14
TCOF1-202ENST00000377797 PDIA5Q14554 519 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 CCDC144BQ3MJ40 725 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 NBPF11Q86T75 865 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 TRIM58Q8NG06 486 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 ACCSQ96QU6 501 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 CEP104O60308 925 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 HOXA7P31268 230 aaPredicted RBP15.91■□□□□ 0.14
TCOF1-202ENST00000377797 SFR1Q86XK3 245 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 FAM163AQ96GL9 167 aaPredicted RBP15.91■□□□□ 0.14
TCOF1-202ENST00000377797 DYDC2Q96IM9 177 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 ANKFY1Q9P2R3 1169 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 SOWAHDA6NJG2 315 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 RPS6KA1Q15418 735 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 CEP55Q53EZ4 464 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 ANGEL2Q5VTE6 544 aaKnown RBP15.91■□□□□ 0.14
TCOF1-202ENST00000377797 DYDC1Q8WWB3 177 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 TRIM9Q9C026 710 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 TUBE1Q9UJT0 475 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 GBP2P32456 591 aaPredicted RBP15.91■□□□□ 0.14
TCOF1-202ENST00000377797 ZBED6P86452 979 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 PEX26Q7Z412 305 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 BANK1Q8NDB2 785 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 NSUN6Q8TEA1 469 aaKnown RBP15.91■□□□□ 0.14
TCOF1-202ENST00000377797 IL17RBQ9NRM6 502 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 FAM217BQ9NTX9 383 aaPredicted RBP15.91■□□□□ 0.14
TCOF1-202ENST00000377797 MTUS1Q9ULD2 1270 aa15.91■□□□□ 0.14
TCOF1-202ENST00000377797 MB21D1Q8N884 522 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 DEFB129Q9H1M3 183 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 ESYT2A0FGR8 921 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 PSAPP07602 524 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 TOB1P50616 345 aaPredicted RBP15.9■□□□□ 0.14
TCOF1-202ENST00000377797 COASYQ13057 564 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 PPP2R5AQ15172 486 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 C8orf74Q6P047 294 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 IL17RAQ96F46 866 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 TMEM206Q9H813 350 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 MYO1AQ9UBC5 1043 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 SEL1L2Q5TEA6 688 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 LPAR1Q92633 364 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 TBC1D22BQ9NU19 505 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 AK9Q5TCS8 1911 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 BUB1O43683 1085 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 OTUD5Q96G74 571 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 NBPF3Q9H094 633 aa15.9■□□□□ 0.14
TCOF1-202ENST00000377797 H2AFZP0C0S5 128 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 FDX1P10109 184 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 PKN1Q16512 942 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 H2AFVQ71UI9 128 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 C1orf112Q9NSG2 853 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 WDR46O15213 610 aaKnown RBP15.89■□□□□ 0.13
TCOF1-202ENST00000377797 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 FCER1AP12319 257 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 ERCC6LQ2NKX8 1250 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 LIN9Q5TKA1 542 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 SLC17A8Q8NDX2 589 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 KCNQ5Q9NR82 932 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 KIAA0754O94854 1291 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 MYL7Q01449 175 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 CXCL9Q07325 125 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 ACRBPQ8NEB7 543 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 ACER1Q8TDN7 264 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 ZNF526Q8TF50 670 aaPredicted RBP15.89■□□□□ 0.13
TCOF1-202ENST00000377797 GGA3Q9NZ52 723 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 FBXO40Q9UH90 709 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.89■□□□□ 0.13
TCOF1-202ENST00000377797 WDR64B1ANS9 1081 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 TEX33O43247 280 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 GSTA5Q7RTV2 222 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 PANX2Q96RD6 677 aa15.89■□□□□ 0.13
TCOF1-202ENST00000377797 DDX4Q9NQI0 724 aaKnown RBP15.89■□□□□ 0.13
TCOF1-202ENST00000377797 LGALS16A8MUM7 142 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 PEX3P56589 373 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms