RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 ZNF233A6NK53 670 aa20.58■□□□□ 0.89
TBC1D4-201ENST00000377625 SH2B2O14492 632 aaPredicted RBP20.58■□□□□ 0.89
TBC1D4-201ENST00000377625 MYL1P05976 194 aa20.58■□□□□ 0.89
TBC1D4-201ENST00000377625 CYP4F22Q6NT55 531 aa20.58■□□□□ 0.89
TBC1D4-201ENST00000377625 PI16Q6UXB8 463 aa20.58■□□□□ 0.89
TBC1D4-201ENST00000377625 EEPD1Q7L9B9 569 aa20.58■□□□□ 0.89
TBC1D4-201ENST00000377625 DACT3Q96B18 629 aaPredicted RBP20.58■□□□□ 0.89
TBC1D4-201ENST00000377625 PUS7LQ9H0K6 701 aaKnown RBP20.58■□□□□ 0.89
TBC1D4-201ENST00000377625 ARPP19P56211 112 aa20.58■□□□□ 0.88
TBC1D4-201ENST00000377625 IL1RL1Q01638 556 aa20.58■□□□□ 0.88
TBC1D4-201ENST00000377625 RCN2Q14257 317 aa20.58■□□□□ 0.88
TBC1D4-201ENST00000377625 PTPN21Q16825 1174 aa20.58■□□□□ 0.88
TBC1D4-201ENST00000377625 SPDL1Q96EA4 605 aa20.58■□□□□ 0.88
TBC1D4-201ENST00000377625 EMILIN3Q9NT22 766 aa20.58■□□□□ 0.88
TBC1D4-201ENST00000377625 RAD17O75943 681 aa20.58■□□□□ 0.88
TBC1D4-201ENST00000377625 USP17L8P0C7I0 530 aa20.58■□□□□ 0.88
TBC1D4-201ENST00000377625 MSH2P43246 934 aa20.58■□□□□ 0.88
TBC1D4-201ENST00000377625 KIAA1841Q6NSI8 718 aa20.58■□□□□ 0.88
TBC1D4-201ENST00000377625 ARHGEF18Q6ZSZ5 1173 aa20.58■□□□□ 0.88
TBC1D4-201ENST00000377625 LRRC4Q9HBW1 653 aa20.58■□□□□ 0.88
TBC1D4-201ENST00000377625 DYNLL2Q96FJ2 89 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 PLEKHF1Q96S99 279 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 PI4KBQ9UBF8 816 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 CDC25AP30304 524 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 LIG3P49916 1009 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 OSTNP61366 133 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 DARS2Q6PI48 645 aaKnown RBP20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 ADGRL2O95490 1459 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 C11orf57Q6ZUT1 292 aaPredicted RBP20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 ARMC9Q7Z3E5 817 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 KCTD6Q8NC69 237 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 CALN1Q9BXU9 219 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 OSBPL3Q9H4L5 887 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 PARVGQ9HBI0 331 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 MYO1EQ12965 1108 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 ATP8A1Q9Y2Q0 1164 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 PRAMEF22A3QJZ6 481 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 BASP1P80723 227 aaKnown RBP20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 LLGL1Q15334 1064 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 OR6B2Q6IFH4 312 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 LRRC43Q8N309 656 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 RWDD2AQ9UIY3 292 aa20.57■□□□□ 0.88
TBC1D4-201ENST00000377625 EPHB4P54760 987 aa20.56■□□□□ 0.88
TBC1D4-201ENST00000377625 UBE2SQ16763 222 aa20.56■□□□□ 0.88
TBC1D4-201ENST00000377625 TRIM42Q8IWZ5 723 aa20.56■□□□□ 0.88
TBC1D4-201ENST00000377625 LINC00301Q8NCQ3 95 aa20.56■□□□□ 0.88
TBC1D4-201ENST00000377625 ATG3Q9NT62 314 aa20.56■□□□□ 0.88
TBC1D4-201ENST00000377625 PSAPP07602 524 aa20.56■□□□□ 0.88
TBC1D4-201ENST00000377625 STMN1P16949 149 aa20.56■□□□□ 0.88
TBC1D4-201ENST00000377625 TCP11X2Q5H9J9 407 aa20.56■□□□□ 0.88
TBC1D4-201ENST00000377625 PRPF3O43395 683 aaKnown RBP20.56■□□□□ 0.88
TBC1D4-201ENST00000377625 DDIT3P35638 169 aa20.56■□□□□ 0.88
TBC1D4-201ENST00000377625 CD58P19256 250 aa20.56■□□□□ 0.88
TBC1D4-201ENST00000377625 TMED2Q15363 201 aa20.56■□□□□ 0.88
TBC1D4-201ENST00000377625 NLRP10Q86W26 655 aa20.56■□□□□ 0.88
TBC1D4-201ENST00000377625 CCDC197Q8NCU1 140 aa20.56■□□□□ 0.88
TBC1D4-201ENST00000377625 PLA2G4BP0C869 781 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 THOC5Q13769 683 aaKnown RBP20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 ZMYND10O75800 440 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 FTCDO95954 541 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 MXI1P50539 228 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 ZNF449Q6P9G9 518 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 OSBP2Q969R2 916 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 PPP1R16BQ96T49 567 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 FTOQ9C0B1 505 aaKnown RBP eCLIP20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 UBN1Q9NPG3 1134 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 TMEM94Q12767 1356 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 SPDYE2BA6NHP3 402 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 SPDYE6P0CI01 402 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 MIGA2Q7L4E1 593 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 SIX6OS1Q8N1H7 587 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 CDC37Q16543 378 aaPredicted RBP20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 ARHGEF25Q86VW2 580 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 MOCS3O95396 460 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 IFNAR1P17181 557 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 KCNQ4P56696 695 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 ZSWIM5Q9P217 1185 aa20.55■□□□□ 0.88
TBC1D4-201ENST00000377625 SLC8A1P32418 973 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 TTC1Q99614 292 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 TLK1Q9UKI8 766 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 CSPG5O95196 566 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 TMTC3Q6ZXV5 915 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 ATP8B3O60423 1300 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 PLCG1P19174 1290 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 CCT5P48643 541 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 SEPT2Q15019 361 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 FNDC3AQ9Y2H6 1198 aaKnown RBP20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 CYP2D7A0A087X1C5 515 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 PRPSAP2O60256 369 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 CXCR5P32302 372 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 C2orf54Q08AI8 447 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 PSMD2Q13200 908 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 SLC12A1Q13621 1099 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 ZKSCAN8Q15776 578 aaPredicted RBP20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 AATKQ6ZMQ8 1374 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 EVI5O60447 810 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 PDXDC2PQ6P474 469 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 THAP9Q9H5L6 903 aa20.54■□□□□ 0.88
TBC1D4-201ENST00000377625 SPECC1L-ADORA2AF8WAN1 911 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.53■□□□□ 0.885e-7■■■■□ 23.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms