RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 USP17L15C9J2P7 530 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 USP17L13C9JLJ4 530 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 USP17L11C9JVI0 530 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 USP17L18D6R9N7 530 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 USP17L22D6RA61 530 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 USP17L17D6RBQ6 530 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 USP17L19D6RCP7 530 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 USP17L20D6RJB6 530 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 MPHOSPH10O00566 681 aaKnown RBP12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 MEIS2O14770 477 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 TBX3O15119 743 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 MARCH6O60337 910 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 TLR2O60603 784 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 MOCS3O95396 460 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 EEF2P13639 858 aaKnown RBP12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 USP17L24Q0WX57 530 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 DOK7Q18PE1 504 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 EDRF1Q3B7T1 1238 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 ARSHQ5FYA8 562 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 TATDN1Q6P1N9 297 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 USP17L6PQ6QN14 398 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 PPP4R3CPQ6ZMV5 832 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 SIAH1Q8IUQ4 282 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 CCDC155Q8N6L0 562 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 COG1Q8WTW3 980 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 IDI2Q9BXS1 227 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 ANO3Q9BYT9 981 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 DEF6Q9H4E7 631 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 VPS18Q9P253 973 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 SALL4Q9UJQ4 1053 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 FAM184BQ9ULE4 1060 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 SYF2O95926 243 aaKnown RBP12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 SERPING1P05155 500 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 HMGB2P26583 209 aaKnown RBP12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 ALDH1B1P30837 517 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 SLC1A4P43007 532 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 CRKP46108 304 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 MMP14P50281 582 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 FKBP1AP62942 108 aaKnown RBP12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 HDLBPQ00341 1268 aaKnown RBP12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 SLC9C1Q4G0N8 1177 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 Q4G0T1 1027 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 FAM83BQ5T0W9 1011 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 CACNA2D4Q7Z3S7 1137 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 PODNQ7Z5L7 613 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 ETNPPLQ8TBG4 499 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 CAGE1Q8TC20 777 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 ALS2CR12Q96Q35 445 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 OSBPL9Q96SU4 736 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 EMILIN3Q9NT22 766 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 TRPC5Q9UL62 973 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 HPCAL4Q9UM19 191 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 FAN1Q9Y2M0 1017 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 SIPA1L1O43166 1804 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 POTEB3A0JP26 581 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 POTECB2RU33 542 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 MED24O75448 989 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 ATP2B2Q01814 1243 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 GFPT1Q06210 699 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 CCDC40Q4G0X9 1142 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 HSP90B2PQ58FF3 399 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 SLFN13Q68D06 897 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 POTEBQ6S5H4 581 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 GPBP1Q86WP2 473 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 SPATA4Q8NEY3 305 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 P2RX7Q99572 595 aaKnown RBP12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 AIPL1Q9NZN9 384 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 PI4KBQ9UBF8 816 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 HYOU1Q9Y4L1 999 aa12.98□□□□□ -0.33
TNFRSF9-201ENST00000377507 ADAMTSL1Q8N6G6 1762 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 ATAD5Q96QE3 1844 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 AFF2P51816 1311 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 RPS6KA5O75582 802 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 PRPF6O94906 941 aaKnown RBP12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 SLURP2P0DP57 97 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 ARHGAP4P98171 946 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 CDC37Q16543 378 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 HERC4Q5GLZ8 1057 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 SFMBT2Q5VUG0 894 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 HAUS3Q68CZ6 603 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 CATSPER3Q86XQ3 398 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 NLGN1Q8N2Q7 840 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 GMCL1P1Q8NEA9 526 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 AENQ8WTP8 325 aaKnown RBP12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 LENG9Q96B70 501 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 NOX5Q96PH1 765 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 TLR10Q9BXR5 811 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 TANGO6Q9C0B7 1094 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 TRAF3IP3Q9Y228 551 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 STK24Q9Y6E0 443 aa12.97□□□□□ -0.33
TNFRSF9-201ENST00000377507 NPHP3-ACAD11A0A0J9YXS1 232 aa12.96□□□□□ -0.33
TNFRSF9-201ENST00000377507 DDTLA6NHG4 134 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF9-201ENST00000377507 SSBP05455 408 aaKnown RBP eCLIP12.96□□□□□ -0.33
TNFRSF9-201ENST00000377507 SPATA31C1P0DKV0 1188 aa12.96□□□□□ -0.33
TNFRSF9-201ENST00000377507 MYBL2P10244 700 aa12.96□□□□□ -0.33
TNFRSF9-201ENST00000377507 RPA1P27694 616 aa12.96□□□□□ -0.33
TNFRSF9-201ENST00000377507 CIITAP33076 1130 aa12.96□□□□□ -0.33
TNFRSF9-201ENST00000377507 C2orf54Q08AI8 447 aa12.96□□□□□ -0.33
TNFRSF9-201ENST00000377507 CERKLQ49MI3 558 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms