RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 HMX1Q9NP08 348 aaPredicted RBP23.82■■□□□ 1.4
HLA-C-201ENST00000376228 HOMER2Q9NSB8 354 aa23.82■■□□□ 1.4
HLA-C-201ENST00000376228 PCDHA5Q9Y5H7 936 aa23.82■■□□□ 1.4
HLA-C-201ENST00000376228 ATP2A1O14983 1001 aa23.81■■□□□ 1.4
HLA-C-201ENST00000376228 SLC37A4O43826 429 aa23.81■■□□□ 1.4
HLA-C-201ENST00000376228 UBA7P41226 1012 aa23.81■■□□□ 1.4
HLA-C-201ENST00000376228 ARHGAP4P98171 946 aa23.81■■□□□ 1.4
HLA-C-201ENST00000376228 KCTD2Q14681 263 aa23.81■■□□□ 1.4
HLA-C-201ENST00000376228 MAP3K21Q5TCX8 1036 aa23.81■■□□□ 1.4
HLA-C-201ENST00000376228 ABRAQ8N0Z2 381 aa23.81■■□□□ 1.4
HLA-C-201ENST00000376228 ERCC4Q92889 916 aaPredicted RBP23.81■■□□□ 1.4
HLA-C-201ENST00000376228 AGBL1Q96MI9 1066 aa23.81■■□□□ 1.4
HLA-C-201ENST00000376228 RAB34Q9BZG1 259 aa23.81■■□□□ 1.4
HLA-C-201ENST00000376228 MAP3K20Q9NYL2 800 aaKnown RBP23.81■■□□□ 1.4
HLA-C-201ENST00000376228 DDX25Q9UHL0 483 aaKnown RBP23.81■■□□□ 1.4
HLA-C-201ENST00000376228 GCOM1H8Y6P7 765 aaPredicted RBP23.8■■□□□ 1.4
HLA-C-201ENST00000376228 SGPL1O95470 568 aa23.8■■□□□ 1.4
HLA-C-201ENST00000376228 POLR2MP0CAP2 368 aa23.8■■□□□ 1.4
HLA-C-201ENST00000376228 TAL1P17542 331 aaPredicted RBP23.8■■□□□ 1.4
HLA-C-201ENST00000376228 CCND3P30281 292 aaPredicted RBP23.8■■□□□ 1.4
HLA-C-201ENST00000376228 CYP2C19P33261 490 aa23.8■■□□□ 1.4
HLA-C-201ENST00000376228 COPB2P35606 906 aa23.8■■□□□ 1.4
HLA-C-201ENST00000376228 TMEM266Q2M3C6 531 aa23.8■■□□□ 1.4
HLA-C-201ENST00000376228 PDXDC2PQ6P474 469 aa23.8■■□□□ 1.4
HLA-C-201ENST00000376228 C11orf57Q6ZUT1 292 aaPredicted RBP23.8■■□□□ 1.4
HLA-C-201ENST00000376228 PAGE5Q96GU1 130 aa23.8■■□□□ 1.4
HLA-C-201ENST00000376228 CUEDC2Q9H467 287 aa23.8■■□□□ 1.4
HLA-C-201ENST00000376228 DISC1Q9NRI5 854 aa23.8■■□□□ 1.4
HLA-C-201ENST00000376228 CCDC39Q9UFE4 941 aa23.8■■□□□ 1.4
HLA-C-201ENST00000376228 TBX3O15119 743 aa23.79■■□□□ 1.4
HLA-C-201ENST00000376228 Q4G0T1 1027 aa23.79■■□□□ 1.4
HLA-C-201ENST00000376228 MAGEF1Q9HAY2 307 aa23.79■■□□□ 1.4
HLA-C-201ENST00000376228 SLC26A4O43511 780 aa23.79■■□□□ 1.4
HLA-C-201ENST00000376228 SMC2O95347 1197 aa23.79■■□□□ 1.4
HLA-C-201ENST00000376228 OAZ1P54368 228 aa23.79■■□□□ 1.4
HLA-C-201ENST00000376228 MFSD14CQ5VZR4 134 aa23.79■■□□□ 1.4
HLA-C-201ENST00000376228 KCNMB3Q9NPA1 279 aa23.79■■□□□ 1.4
HLA-C-201ENST00000376228 TFRCP02786 760 aaKnown RBP23.78■■□□□ 1.4
HLA-C-201ENST00000376228 HSD17B4P51659 736 aa23.78■■□□□ 1.4
HLA-C-201ENST00000376228 LUZP1Q86V48 1076 aa23.78■■□□□ 1.4
HLA-C-201ENST00000376228 HAS1Q92839 578 aa23.78■■□□□ 1.4
HLA-C-201ENST00000376228 SMARCE1Q969G3 411 aa23.78■■□□□ 1.4
HLA-C-201ENST00000376228 MAML3Q96JK9 1138 aa23.78■■□□□ 1.4
HLA-C-201ENST00000376228 EHMT1Q9H9B1 1298 aa23.78■■□□□ 1.4
HLA-C-201ENST00000376228 SLC5A4Q9NY91 659 aa23.78■■□□□ 1.4
HLA-C-201ENST00000376228 CCPG1Q9ULG6 757 aa23.78■■□□□ 1.4
HLA-C-201ENST00000376228 MYL1P05976 194 aa23.77■■□□□ 1.4
HLA-C-201ENST00000376228 TECP42680 631 aa23.77■■□□□ 1.4
HLA-C-201ENST00000376228 TXKP42681 527 aa23.77■■□□□ 1.4
HLA-C-201ENST00000376228 SEMA3FQ13275 785 aa23.77■■□□□ 1.4
HLA-C-201ENST00000376228 DPCR1Q3MIW9 517 aa23.77■■□□□ 1.4
HLA-C-201ENST00000376228 CABP7Q86V35 215 aa23.77■■□□□ 1.4
HLA-C-201ENST00000376228 MCF2L2Q86YR7 1114 aa23.77■■□□□ 1.4
HLA-C-201ENST00000376228 GSDMAQ96QA5 445 aa23.77■■□□□ 1.4
HLA-C-201ENST00000376228 MAF1Q9H063 256 aa23.77■■□□□ 1.4
HLA-C-201ENST00000376228 CFBP00751 764 aa23.76■■□□□ 1.39
HLA-C-201ENST00000376228 PRR29P0C7W0 189 aa23.76■■□□□ 1.39
HLA-C-201ENST00000376228 ALAS1P13196 640 aa23.76■■□□□ 1.39
HLA-C-201ENST00000376228 DPYDQ12882 1025 aa23.76■■□□□ 1.39
HLA-C-201ENST00000376228 MORC3Q14149 939 aa23.76■■□□□ 1.39
HLA-C-201ENST00000376228 KARSQ15046 597 aaKnown RBP23.76■■□□□ 1.39
HLA-C-201ENST00000376228 CT47A1Q5JQC4 288 aaPredicted RBP23.76■■□□□ 1.39
HLA-C-201ENST00000376228 RRAGBQ5VZM2 374 aa23.76■■□□□ 1.39
HLA-C-201ENST00000376228 OLFML2BQ68BL8 750 aa23.76■■□□□ 1.39
HLA-C-201ENST00000376228 SLFN12Q8IYM2 578 aa23.76■■□□□ 1.39
HLA-C-201ENST00000376228 CLEC4DQ8WXI8 215 aa23.76■■□□□ 1.39
HLA-C-201ENST00000376228 RNF146Q9NTX7 359 aa23.76■■□□□ 1.39
HLA-C-201ENST00000376228 MCM3APO60318 1980 aa23.76■■□□□ 1.39
HLA-C-201ENST00000376228 GTPBP6O43824 516 aaPredicted RBP23.75■■□□□ 1.39
HLA-C-201ENST00000376228 IGHA2P01877 340 aa23.75■■□□□ 1.39
HLA-C-201ENST00000376228 CNGA1P29973 690 aa23.75■■□□□ 1.39
HLA-C-201ENST00000376228 CDC25AP30304 524 aa23.75■■□□□ 1.39
HLA-C-201ENST00000376228 HOXA13P31271 388 aaPredicted RBP23.75■■□□□ 1.39
HLA-C-201ENST00000376228 STAT6P42226 847 aa23.75■■□□□ 1.39
HLA-C-201ENST00000376228 ZNF792Q3KQV3 632 aa23.75■■□□□ 1.39
HLA-C-201ENST00000376228 NAALADL2Q58DX5 795 aa23.75■■□□□ 1.39
HLA-C-201ENST00000376228 ANKRD35Q8N283 1001 aa23.75■■□□□ 1.39
HLA-C-201ENST00000376228 TRPV1Q8NER1 839 aa23.75■■□□□ 1.39
HLA-C-201ENST00000376228 MMTAG2Q9BU76 263 aaKnown RBP23.75■■□□□ 1.39
HLA-C-201ENST00000376228 TTC12Q9H892 705 aaPredicted RBP23.75■■□□□ 1.39
HLA-C-201ENST00000376228 LRWD1Q9UFC0 647 aa23.75■■□□□ 1.39
HLA-C-201ENST00000376228 MAN1B1Q9UKM7 699 aa23.75■■□□□ 1.39
HLA-C-201ENST00000376228 PP2D1A8MPX8 630 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 BIN1O00499 593 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 DHX40Q8IX18 779 aaKnown RBP23.74■■□□□ 1.39
HLA-C-201ENST00000376228 MLKLQ8NB16 471 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 CHST13Q8NET6 341 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 TBC1D5Q92609 795 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 FAM20AQ96MK3 541 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 TRERF1Q96PN7 1200 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 CRISPLD2Q9H0B8 497 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 ACAD9Q9H845 621 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 PCDHA12Q9UN75 941 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 PDE4DIPQ5VU43 2346 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 LCTP09848 1927 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-201ENST00000376228 IKBKBO14920 756 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 MUM1L1Q5H9M0 696 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 PRAMEF19Q5SWL8 479 aa23.74■■□□□ 1.39
HLA-C-201ENST00000376228 GRAMD1CQ8IYS0 662 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms