RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 SPATC1LQ9H0A9 340 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 A1CFQ9NQ94 594 aaKnown RBP12.43□□□□□ -0.42
PDPN-202ENST00000376057 PNMA3Q9UL41 463 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 A0A087WWV3 80 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 MYMKA6NI61 221 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 GOLGA6L6A8MZA4 724 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 GAS7O60861 476 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 EYA4O95677 639 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 ARP10275 920 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 CETPP11597 493 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 CD44P16070 742 aaKnown RBP12.43□□□□□ -0.42
PDPN-202ENST00000376057 ICAM3P32942 547 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 GJA5P36382 358 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 IRX3P78415 501 aaPredicted RBP12.43□□□□□ -0.42
PDPN-202ENST00000376057 ARHGEF16Q5VV41 709 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 CDKAL1Q5VV42 579 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 NLRX1Q86UT6 975 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 DNAJC19Q96DA6 116 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 MED15Q96RN5 788 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 BMP2KQ9NSY1 1161 aaPredicted RBP12.43□□□□□ -0.42
PDPN-202ENST00000376057 BTBD7Q9P203 1132 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 DNM3Q9UQ16 869 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 SOCS7O14512 581 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 CBFA2T2O43439 604 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 FMR1Q06787 632 aaKnown RBP eCLIP12.43□□□□□ -0.42
PDPN-202ENST00000376057 STIM1Q13586 685 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 MCM6Q14566 821 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 KCNK18Q7Z418 384 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 ANKRD23Q86SG2 305 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 NOC3LQ8WTT2 800 aaKnown RBP12.43□□□□□ -0.42
PDPN-202ENST00000376057 TRIM44Q96DX7 344 aaPredicted RBP12.43□□□□□ -0.42
PDPN-202ENST00000376057 IMPACTQ9P2X3 320 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 KIAA1024Q9UPX6 916 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
PDPN-202ENST00000376057 SLITRK3O94933 977 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 NR3C2P08235 984 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 PLA2G4BP0C869 781 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 EDNRBP24530 442 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 SFNP31947 248 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 MTMR1Q13613 665 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 NCAPH2Q6IBW4 605 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 MOB2Q70IA6 237 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 IL31RAQ8NI17 732 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 MS4A4AQ96JQ5 239 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 TRIM5Q9C035 493 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 MROH8Q9H579 483 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 RRAGCQ9HB90 399 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 GBA2Q9HCG7 927 aaPredicted RBP12.42□□□□□ -0.42
PDPN-202ENST00000376057 EXOC1Q9NV70 894 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 TESPA1A2RU30 521 aaPredicted RBP12.42□□□□□ -0.42
PDPN-202ENST00000376057 LRRC10BA6NIK2 292 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 EML1O00423 815 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 CASP1P29466 404 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 PAK1Q13153 545 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 ISM2Q6H9L7 571 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 C2orf69Q8N8R5 385 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 STAMQ92783 540 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 ZCCHC17Q9NP64 241 aaKnown RBP12.42□□□□□ -0.42
PDPN-202ENST00000376057 HOMER2Q9NSB8 354 aa12.42□□□□□ -0.42
PDPN-202ENST00000376057 SYNRGQ9UMZ2 1314 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 B4DLN1 442 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 JAK3P52333 1124 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 KRT76Q01546 638 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 MAP1SQ66K74 1059 aaPredicted RBP12.41□□□□□ -0.42
PDPN-202ENST00000376057 SAMD1Q6SPF0 538 aaPredicted RBP12.41□□□□□ -0.42
PDPN-202ENST00000376057 NSMFQ6X4W1 530 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 DDX12PQ92771 950 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 GJA10Q969M2 543 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 NACC1Q96RE7 527 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 UNC45AQ9H3U1 944 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 RBPJLQ9UBG7 517 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 POTEB3A0JP26 581 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 BICDL2A1A5D9 508 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 CYP11B2P19099 503 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 PRCPP42785 496 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 ASIC1P78348 528 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 ZNF746Q6NUN9 644 aaPredicted RBP12.41□□□□□ -0.42
PDPN-202ENST00000376057 POTEBQ6S5H4 581 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 GUF1Q8N442 669 aaKnown RBP12.41□□□□□ -0.42
PDPN-202ENST00000376057 MORC4Q8TE76 937 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 PLIN2Q99541 437 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 FANCLQ9NW38 375 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 DBR1Q9UK59 544 aaKnown RBP12.41□□□□□ -0.42
PDPN-202ENST00000376057 NFE2L3Q9Y4A8 694 aa12.41□□□□□ -0.42
PDPN-202ENST00000376057 SPATA31C2B4DYI2 1134 aa12.4□□□□□ -0.42
PDPN-202ENST00000376057 EIF3JO75822 258 aaKnown RBP12.4□□□□□ -0.42
PDPN-202ENST00000376057 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
PDPN-202ENST00000376057 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
PDPN-202ENST00000376057 FANCCQ00597 558 aa12.4□□□□□ -0.42
PDPN-202ENST00000376057 CTAGE1Q96RT6 745 aa12.4□□□□□ -0.42
PDPN-202ENST00000376057 ADD3Q9UEY8 706 aaKnown RBP12.4□□□□□ -0.42
PDPN-202ENST00000376057 DNAJC25-GNG10A0A024R161 153 aa12.4□□□□□ -0.42
PDPN-202ENST00000376057 PSMA7O14818 248 aa12.4□□□□□ -0.42
PDPN-202ENST00000376057 ITGBL1O95965 494 aaPredicted RBP12.4□□□□□ -0.42
PDPN-202ENST00000376057 P4HBP07237 508 aaKnown RBP12.4□□□□□ -0.42
PDPN-202ENST00000376057 EIF2AK2P19525 551 aaKnown RBP12.4□□□□□ -0.42
PDPN-202ENST00000376057 SPAG1Q07617 926 aa12.4□□□□□ -0.42
PDPN-202ENST00000376057 PDE4DQ08499 809 aa12.4□□□□□ -0.42
PDPN-202ENST00000376057 ITGB3BPQ13352 177 aaPredicted RBP12.4□□□□□ -0.42
PDPN-202ENST00000376057 CCDC65Q8IXS2 484 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms