RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 IGDCC4Q8TDY8 1250 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 IL17RAQ96F46 866 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 JAKMIP1Q96N16 626 aaKnown RBP14.06□□□□□ -0.16
LSM2-208ENST00000375661 UBAC1Q9BSL1 405 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 BACH2Q9BYV9 841 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 SENP2Q9HC62 589 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 CD320Q9NPF0 282 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 PXMP2Q9NR77 195 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 MTUS1Q9ULD2 1270 aa14.06□□□□□ -0.16
LSM2-208ENST00000375661 IFIT3O14879 490 aaKnown RBP14.05□□□□□ -0.16
LSM2-208ENST00000375661 PRC1O43663 620 aa14.05□□□□□ -0.16
LSM2-208ENST00000375661 ZNF286BP0CG31 522 aa14.05□□□□□ -0.16
LSM2-208ENST00000375661 TGFB3P10600 412 aa14.05□□□□□ -0.16
LSM2-208ENST00000375661 ALADP13716 330 aa14.05□□□□□ -0.16
LSM2-208ENST00000375661 EIF2AK2P19525 551 aaKnown RBP14.05□□□□□ -0.16
LSM2-208ENST00000375661 HSD17B4P51659 736 aa14.05□□□□□ -0.16
LSM2-208ENST00000375661 DHX32Q7L7V1 743 aaKnown RBP14.05□□□□□ -0.16
LSM2-208ENST00000375661 SERINC5Q86VE9 423 aa14.05□□□□□ -0.16
LSM2-208ENST00000375661 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.05□□□□□ -0.16
LSM2-208ENST00000375661 MRPL38Q96DV4 380 aaKnown RBP14.05□□□□□ -0.16
LSM2-208ENST00000375661 MTA3Q9BTC8 594 aa14.05□□□□□ -0.16
LSM2-208ENST00000375661 LRRC2Q9BYS8 371 aa14.05□□□□□ -0.16
LSM2-208ENST00000375661 CPVLQ9H3G5 476 aa14.05□□□□□ -0.16
LSM2-208ENST00000375661 KAT6AQ92794 2004 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 RSPH10B2B2RC85 870 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 CAND2O75155 1236 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 PARP1P09874 1014 aaKnown RBP14.04□□□□□ -0.16
LSM2-208ENST00000375661 RSPH10BP0C881 870 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 KCNA5P22460 613 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 ANAPC15P60006 121 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 MBTPS1Q14703 1052 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 TIGD5Q53EQ6 642 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 MYSM1Q5VVJ2 828 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.04□□□□□ -0.16
LSM2-208ENST00000375661 WNT8BQ93098 351 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 TCEANC2Q96MN5 208 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 PDCD2LQ9BRP1 358 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 AMNQ9BXJ7 453 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 JMJD4Q9H9V9 463 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 ZSWIM6Q9HCJ5 1215 aa14.04□□□□□ -0.16
LSM2-208ENST00000375661 FAM86C2PA6NEL3 165 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 GRXCR2A6NFK2 248 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 SH2B2O14492 632 aaPredicted RBP14.03□□□□□ -0.16
LSM2-208ENST00000375661 DHX16O60231 1041 aaKnown RBP14.03□□□□□ -0.16
LSM2-208ENST00000375661 CFBP00751 764 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 HMGB1P09429 215 aaKnown RBP14.03□□□□□ -0.16
LSM2-208ENST00000375661 RPS6KB1P23443 525 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 PSMA5P28066 241 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 TRAF1Q13077 416 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 HSDL1Q3SXM5 330 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 PLEKHG4Q58EX7 1191 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 CELF3Q5SZQ8 465 aaKnown RBP14.03□□□□□ -0.16
LSM2-208ENST00000375661 IFIT1BQ5T764 474 aaKnown RBP14.03□□□□□ -0.16
LSM2-208ENST00000375661 PTCRAQ6ISU1 281 aaPredicted RBP14.03□□□□□ -0.16
LSM2-208ENST00000375661 FAM117BQ6P1L5 589 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 MYOCDQ8IZQ8 938 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 DBF4BQ8NFT6 615 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 NEK9Q8TD19 979 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 TMEM87BQ96K49 555 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 SPATA33Q96N06 139 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 C17orf80Q9BSJ5 609 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 TM6SF1Q9BZW5 370 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 LY9Q9HBG7 655 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 FAM50BQ9Y247 325 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 ATG2AQ2TAZ0 1938 aa14.03□□□□□ -0.16
LSM2-208ENST00000375661 H3BNC9 293 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 IL9P15248 144 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 HOXC8P31273 242 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 SSTR3P32745 418 aaPredicted RBP14.02□□□□□ -0.17
LSM2-208ENST00000375661 THPOP40225 353 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 LIFRP42702 1097 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 ZNF200P98182 395 aaPredicted RBP14.02□□□□□ -0.17
LSM2-208ENST00000375661 WTAPQ15007 396 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 SART3Q15020 963 aaKnown RBP14.02□□□□□ -0.17
LSM2-208ENST00000375661 PGM5Q15124 567 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 EPC2Q52LR7 807 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 BLOC1S2Q6QNY1 142 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 VSIG10LQ86VR7 867 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 SEPT8Q92599 483 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 MTMR8Q96EF0 704 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 C16orf70Q9BSU1 422 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 C22orf23Q9BZE7 217 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 KCNH6Q9H252 994 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 PRKAG3Q9UGI9 489 aa14.02□□□□□ -0.17
LSM2-208ENST00000375661 ERICH2A1L162 156 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 C17orf102A2RUQ5 167 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 H3BRB1 525 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 OPLAHO14841 1288 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 NCK2O43639 380 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 RGS20O76081 388 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 GGPS1O95749 300 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 GNAT1P11488 350 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 RBM25P49756 843 aaKnown RBP14.01□□□□□ -0.17
LSM2-208ENST00000375661 HIC1Q14526 733 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 COL19A1Q14993 1142 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 RUFY3Q7L099 469 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 BANK1Q8NDB2 785 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 APBB2Q92870 758 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 ATP6V0A1Q93050 837 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 TOP1MTQ969P6 601 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms