RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 DDX39AO00148 427 aaKnown RBP20.28■□□□□ 0.84
RXRB-202ENST00000374685 NPM3O75607 178 aaKnown RBP20.28■□□□□ 0.84
RXRB-202ENST00000374685 SLC35F6Q8N357 371 aa20.28■□□□□ 0.84
RXRB-202ENST00000374685 CRACR2AQ9BSW2 395 aa20.28■□□□□ 0.84
RXRB-202ENST00000374685 GJA3Q9Y6H8 435 aa20.28■□□□□ 0.84
RXRB-202ENST00000374685 EPN1Q9Y6I3 576 aaPredicted RBP20.28■□□□□ 0.84
RXRB-202ENST00000374685 GREB1LQ9C091 1923 aaPredicted RBP20.28■□□□□ 0.84
RXRB-202ENST00000374685 EPHB6O15197 1021 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 HNRNPH2P55795 449 aaKnown RBP20.27■□□□□ 0.84
RXRB-202ENST00000374685 CYP27A1Q02318 531 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 TRIM14Q14142 442 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 CTTNQ14247 550 aaKnown RBP20.27■□□□□ 0.84
RXRB-202ENST00000374685 CCDC40Q4G0X9 1142 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 ETNPPLQ8TBG4 499 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 NOC3LQ8WTT2 800 aaKnown RBP20.27■□□□□ 0.84
RXRB-202ENST00000374685 CCDC51Q96ER9 411 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 ZNF341Q9BYN7 854 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 FZD1Q9UP38 647 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 ASTN2O75129 1339 aaPredicted RBP20.27■□□□□ 0.84
RXRB-202ENST00000374685 ZBTB39O15060 712 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 ENOX2Q16206 610 aaKnown RBP20.27■□□□□ 0.84
RXRB-202ENST00000374685 SLFN12Q8IYM2 578 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 JDP2Q8WYK2 163 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 LENG9Q96B70 501 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 PSMD1Q99460 953 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 TMX2Q9Y320 296 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 KDM3AQ9Y4C1 1321 aa20.27■□□□□ 0.84
RXRB-202ENST00000374685 RASSF10A6NK89 507 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 NDUFA10O95299 355 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 CYP11B2P19099 503 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 GUF1Q8N442 669 aaKnown RBP20.26■□□□□ 0.83
RXRB-202ENST00000374685 TSG101Q99816 390 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 BHMT2Q9H2M3 363 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 NDST4Q9H3R1 872 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 YY1AP1Q9H869 796 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 RSPH10B2B2RC85 870 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 EML1O00423 815 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 PLEKP08567 350 aaPredicted RBP20.26■□□□□ 0.83
RXRB-202ENST00000374685 RSPH10BP0C881 870 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 RASA3Q14644 834 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 PRAMEF18Q5VWM3 479 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 WDR59Q6PJI9 974 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 TPH2Q8IWU9 490 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 SREBF1P36956 1147 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 CASP5P51878 434 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 APBA1Q02410 837 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 PPP2R3AQ06190 1150 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 SAMD7Q7Z3H4 446 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 CCDC65Q8IXS2 484 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 AGBL1Q96MI9 1066 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 BCS1LQ9Y276 419 aa20.26■□□□□ 0.83
RXRB-202ENST00000374685 VWA3BQ502W6 1294 aa20.25■□□□□ 0.83
RXRB-202ENST00000374685 ARSHQ5FYA8 562 aa20.25■□□□□ 0.83
RXRB-202ENST00000374685 HAUS3Q68CZ6 603 aa20.25■□□□□ 0.83
RXRB-202ENST00000374685 ZNHIT6Q9NWK9 470 aaKnown RBP20.25■□□□□ 0.83
RXRB-202ENST00000374685 PIM2Q9P1W9 311 aa20.25■□□□□ 0.83
RXRB-202ENST00000374685 CAPN11Q9UMQ6 739 aa20.25■□□□□ 0.83
RXRB-202ENST00000374685 DNM3Q9UQ16 869 aa20.25■□□□□ 0.83
RXRB-202ENST00000374685 ENC1O14682 589 aa20.25■□□□□ 0.83
RXRB-202ENST00000374685 TBC1D10BQ4KMP7 808 aaPredicted RBP20.25■□□□□ 0.83
RXRB-202ENST00000374685 KIAA1328Q86T90 577 aa20.25■□□□□ 0.83
RXRB-202ENST00000374685 NAP1L4Q99733 375 aaKnown RBP20.25■□□□□ 0.83
RXRB-202ENST00000374685 LRRC27Q9C0I9 530 aa20.25■□□□□ 0.83
RXRB-202ENST00000374685 MYOZ2Q9NPC6 264 aa20.25■□□□□ 0.83
RXRB-202ENST00000374685 NLRC4Q9NPP4 1024 aa20.25■□□□□ 0.83
RXRB-202ENST00000374685 A0A1W2PQC6 194 aa20.24■□□□□ 0.83
RXRB-202ENST00000374685 SPIRE1Q08AE8 756 aa20.24■□□□□ 0.83
RXRB-202ENST00000374685 KRT26Q7Z3Y9 468 aa20.24■□□□□ 0.83
RXRB-202ENST00000374685 ERMNQ8TAM6 284 aa20.24■□□□□ 0.83
RXRB-202ENST00000374685 VCPKMTQ9H867 229 aa20.24■□□□□ 0.83
RXRB-202ENST00000374685 REXO2Q9Y3B8 237 aaKnown RBP20.24■□□□□ 0.83
RXRB-202ENST00000374685 GCOM1H8Y6P7 765 aaPredicted RBP20.24■□□□□ 0.83
RXRB-202ENST00000374685 TUBB4AP04350 444 aa20.24■□□□□ 0.83
RXRB-202ENST00000374685 POLR2MP0CAP2 368 aa20.24■□□□□ 0.83
RXRB-202ENST00000374685 CAP2P40123 477 aa20.24■□□□□ 0.83
RXRB-202ENST00000374685 CIAPIN1Q6FI81 312 aa20.24■□□□□ 0.83
RXRB-202ENST00000374685 WDR18Q9BV38 432 aa20.24■□□□□ 0.83
RXRB-202ENST00000374685 ARFGEF1Q9Y6D6 1849 aa20.24■□□□□ 0.83
RXRB-202ENST00000374685 ABCB11O95342 1321 aa20.23■□□□□ 0.83
RXRB-202ENST00000374685 FOSP01100 380 aaPredicted RBP20.23■□□□□ 0.83
RXRB-202ENST00000374685 SPATA31C1P0DKV0 1188 aa20.23■□□□□ 0.83
RXRB-202ENST00000374685 REEP2Q9BRK0 252 aa20.23■□□□□ 0.83
RXRB-202ENST00000374685 IKZF4Q9H2S9 585 aa20.23■□□□□ 0.83
RXRB-202ENST00000374685 C10orf71Q711Q0 1435 aa20.23■□□□□ 0.83
RXRB-202ENST00000374685 CYP3A7-CYP3A51PA0A087WV96 503 aa20.23■□□□□ 0.83
RXRB-202ENST00000374685 CYP3A7P24462 503 aa20.23■□□□□ 0.83
RXRB-202ENST00000374685 INPP5BP32019 993 aa20.23■□□□□ 0.83
RXRB-202ENST00000374685 SFR1Q86XK3 245 aa20.23■□□□□ 0.83
RXRB-202ENST00000374685 TAOK3Q9H2K8 898 aa20.23■□□□□ 0.83
RXRB-202ENST00000374685 EMILIN3Q9NT22 766 aa20.23■□□□□ 0.83
RXRB-202ENST00000374685 PRPF6O94906 941 aaKnown RBP20.22■□□□□ 0.83
RXRB-202ENST00000374685 PPP1R2P41236 205 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 ARID5AQ03989 594 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 LRCH2Q5VUJ6 765 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 BTNL9Q6UXG8 535 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 LRRC55Q6ZSA7 311 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 RRAGAQ7L523 313 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 LDHDQ86WU2 507 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 CHURC1Q8WUH1 139 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 SCFD1Q8WVM8 642 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms