RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 FECHP22830 423 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 CACNB1Q02641 598 aaPredicted RBP21.79■■□□□ 1.08
HDAC1-201ENST00000373548 OTOP1Q7RTM1 612 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 SCYL3Q8IZE3 742 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 ZFP91Q96JP5 570 aaPredicted RBP21.79■■□□□ 1.08
HDAC1-201ENST00000373548 EIF2AK1Q9BQI3 630 aaKnown RBP21.79■■□□□ 1.08
HDAC1-201ENST00000373548 NAA15Q9BXJ9 866 aaKnown RBP21.79■■□□□ 1.08
HDAC1-201ENST00000373548 FGFBP2Q9BYJ0 223 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 SLC38A10Q9HBR0 1119 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 GPRC5DQ9NZD1 345 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 COL20A1Q9P218 1284 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 DNM3Q9UQ16 869 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 PCDHA2Q9Y5H9 948 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 SOWAHDA6NJG2 315 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 B4DLN1 442 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 PES1O00541 588 aaKnown RBP21.79■■□□□ 1.08
HDAC1-201ENST00000373548 ZSCAN12O43309 604 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 FLOT1O75955 427 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 DNM2P50570 870 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 CYP4A11Q02928 519 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 LRRC63Q05C16 580 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 PABPC4Q13310 644 aaKnown RBP eCLIP21.79■■□□□ 1.083e-9■■□□□ 13.8
HDAC1-201ENST00000373548 MTF1Q14872 753 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 LRCH2Q5VUJ6 765 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 MYOCDQ8IZQ8 938 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 CPXCR1Q8N123 301 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 SYT2Q8N9I0 419 aaPredicted RBP21.79■■□□□ 1.08
HDAC1-201ENST00000373548 PPP1R9AQ9ULJ8 1098 aa21.79■■□□□ 1.08
HDAC1-201ENST00000373548 PITPNM2Q9BZ72 1349 aa21.78■■□□□ 1.08
HDAC1-201ENST00000373548 FRMD3A2A2Y4 597 aa21.78■■□□□ 1.08
HDAC1-201ENST00000373548 MTIF2P46199 727 aaKnown RBP21.78■■□□□ 1.08
HDAC1-201ENST00000373548 RAD51AP2Q09MP3 1159 aa21.78■■□□□ 1.08
HDAC1-201ENST00000373548 SPP2Q13103 211 aa21.78■■□□□ 1.08
HDAC1-201ENST00000373548 FOXR2Q6PJQ5 311 aa21.78■■□□□ 1.08
HDAC1-201ENST00000373548 ZKSCAN4Q969J2 545 aaPredicted RBP21.78■■□□□ 1.08
HDAC1-201ENST00000373548 RPAP3Q9H6T3 665 aaPredicted RBP21.78■■□□□ 1.08
HDAC1-201ENST00000373548 RAVER2Q9HCJ3 691 aaKnown RBP21.78■■□□□ 1.08
HDAC1-201ENST00000373548 RGL1Q9NZL6 768 aa21.78■■□□□ 1.08
HDAC1-201ENST00000373548 NKRFO15226 690 aaKnown RBP eCLIP21.77■■□□□ 1.08
HDAC1-201ENST00000373548 GHRHRQ02643 423 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 PPP2R5CQ13362 524 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 MIIPQ5JXC2 388 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 KIF18AQ8NI77 898 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 WRNIP1Q96S55 665 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 TBC1D7Q9P0N9 293 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 FZD1Q9UP38 647 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 RPTORQ8N122 1335 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 KRT18P05783 430 aaKnown RBP21.77■■□□□ 1.08
HDAC1-201ENST00000373548 ARP10275 920 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 ALAS1P13196 640 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 USP14P54578 494 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 ZCWPW2Q504Y3 356 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 RAD9BQ6WBX8 426 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 LRRC55Q6ZSA7 311 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 ABHD10Q9NUJ1 306 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 PHIPQ8WWQ0 1821 aa21.77■■□□□ 1.08
HDAC1-201ENST00000373548 SBF1O95248 1867 aa21.76■■□□□ 1.07
HDAC1-201ENST00000373548 HERC4Q5GLZ8 1057 aaPredicted RBP21.76■■□□□ 1.07
HDAC1-201ENST00000373548 ARHGAP27Q6ZUM4 889 aa21.76■■□□□ 1.07
HDAC1-201ENST00000373548 HSD17B14Q9BPX1 270 aa21.76■■□□□ 1.07
HDAC1-201ENST00000373548 DESI2Q9BSY9 194 aa21.76■■□□□ 1.07
HDAC1-201ENST00000373548 NOC4LQ9BVI4 516 aaKnown RBP21.76■■□□□ 1.07
HDAC1-201ENST00000373548 GGA3Q9NZ52 723 aa21.76■■□□□ 1.07
HDAC1-201ENST00000373548 PTPRAP18433 802 aa21.76■■□□□ 1.07
HDAC1-201ENST00000373548 BACE1P56817 501 aa21.76■■□□□ 1.07
HDAC1-201ENST00000373548 SETQ01105 290 aaPredicted RBP21.76■■□□□ 1.07
HDAC1-201ENST00000373548 GIT2Q14161 759 aa21.76■■□□□ 1.07
HDAC1-201ENST00000373548 MUM1L1Q5H9M0 696 aa21.76■■□□□ 1.07
HDAC1-201ENST00000373548 TRIM65Q6PJ69 517 aa21.76■■□□□ 1.07
HDAC1-201ENST00000373548 SYT10Q6XYQ8 523 aa21.76■■□□□ 1.07
HDAC1-201ENST00000373548 MCF2L2Q86YR7 1114 aa21.76■■□□□ 1.07
HDAC1-201ENST00000373548 GPC2Q8N158 579 aa21.76■■□□□ 1.07
HDAC1-201ENST00000373548 TSG101Q99816 390 aa21.76■■□□□ 1.07
HDAC1-201ENST00000373548 CHMP2AO43633 222 aa21.75■■□□□ 1.07
HDAC1-201ENST00000373548 GAS7O60861 476 aa21.75■■□□□ 1.07
HDAC1-201ENST00000373548 TUBB4AP04350 444 aa21.75■■□□□ 1.07
HDAC1-201ENST00000373548 LMNB1P20700 586 aa21.75■■□□□ 1.07
HDAC1-201ENST00000373548 KRT9P35527 623 aa21.75■■□□□ 1.07
HDAC1-201ENST00000373548 HIRAP54198 1017 aaPredicted RBP21.75■■□□□ 1.07
HDAC1-201ENST00000373548 TSC1Q92574 1164 aa21.75■■□□□ 1.07
HDAC1-201ENST00000373548 MXRA8Q9BRK3 442 aa21.75■■□□□ 1.07
HDAC1-201ENST00000373548 ZNF577Q9BSK1 485 aa21.75■■□□□ 1.07
HDAC1-201ENST00000373548 TUFT1Q9NNX1 390 aa21.75■■□□□ 1.07
HDAC1-201ENST00000373548 RABGAP1Q9Y3P9 1069 aa21.75■■□□□ 1.07
HDAC1-201ENST00000373548 RLFQ13129 1914 aa21.75■■□□□ 1.07
HDAC1-201ENST00000373548 POLR2AP24928 1970 aaKnown RBP21.75■■□□□ 1.07
HDAC1-201ENST00000373548 TTC26A0AVF1 554 aa21.74■■□□□ 1.07
HDAC1-201ENST00000373548 EYA4O95677 639 aa21.74■■□□□ 1.07
HDAC1-201ENST00000373548 FGFR1OPO95684 399 aaKnown RBP21.74■■□□□ 1.07
HDAC1-201ENST00000373548 EPS15P42566 896 aa21.74■■□□□ 1.07
HDAC1-201ENST00000373548 ETF1P62495 437 aaKnown RBP21.74■■□□□ 1.07
HDAC1-201ENST00000373548 TBC1D8BQ0IIM8 1120 aa21.74■■□□□ 1.07
HDAC1-201ENST00000373548 KCTD17Q8N5Z5 321 aa21.74■■□□□ 1.07
HDAC1-201ENST00000373548 ZNF280CQ8ND82 737 aa21.74■■□□□ 1.07
HDAC1-201ENST00000373548 IL31RAQ8NI17 732 aa21.74■■□□□ 1.07
HDAC1-201ENST00000373548 REEP2Q9BRK0 252 aa21.74■■□□□ 1.07
HDAC1-201ENST00000373548 BHMT2Q9H2M3 363 aa21.74■■□□□ 1.07
HDAC1-201ENST00000373548 AS3MTQ9HBK9 375 aa21.74■■□□□ 1.07
HDAC1-201ENST00000373548 PICK1Q9NRD5 415 aa21.74■■□□□ 1.07
HDAC1-201ENST00000373548 HOMER2Q9NSB8 354 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms