RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 HHIPL2Q6UWX4 724 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 UNC13DQ70J99 1090 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 DYDC2Q96IM9 177 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 ALS2CR12Q96Q35 445 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 RIOX1Q9H6W3 641 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 KBTBD4Q9NVX7 518 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 EHD2Q9NZN4 543 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 OGFRQ9NZT2 677 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 GOLGA8IPA6NC78 632 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 GOLGA8JA6NMD2 632 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 RHOBTB3O94955 611 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 SH3RF1Q7Z6J0 888 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 FAM178BQ8IXR5 827 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 FGFBP2Q9BYJ0 223 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 TRIM31Q9BZY9 425 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 HYOU1Q9Y4L1 999 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 SAR1BQ9Y6B6 198 aa14.56□□□□□ -0.08
NCDN-203ENST00000373253 MYH3P11055 1940 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 RASA3Q14644 834 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 VWA3BQ502W6 1294 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 DACT2Q5SW24 774 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 NAA35Q5VZE5 725 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 KLHL7Q8IXQ5 586 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 CHURC1Q8WUH1 139 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 PNMA5Q96PV4 448 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 DNAJC18Q9H819 358 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 ABCC6O95255 1503 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 CDKAL1Q5VV42 579 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 TRIM65Q6PJ69 517 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 PHLDB2Q86SQ0 1253 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 CEP112Q8N8E3 955 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 ZNF668Q96K58 619 aaPredicted RBP14.55□□□□□ -0.08
NCDN-203ENST00000373253 PURBQ96QR8 312 aaKnown RBP14.55□□□□□ -0.08
NCDN-203ENST00000373253 LACRTQ9GZZ8 138 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 ZNF408Q9H9D4 720 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 NWD2Q9ULI1 1742 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 TMEM150BA6NC51 233 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 XRCC5P13010 732 aaKnown RBP14.55□□□□□ -0.08
NCDN-203ENST00000373253 C2orf54Q08AI8 447 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 SF3A3Q12874 501 aaKnown RBP eCLIP14.55□□□□□ -0.08
NCDN-203ENST00000373253 KIAA0753Q2KHM9 967 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 NT5DC1Q5TFE4 455 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 MMTAG2Q9BU76 263 aaKnown RBP14.55□□□□□ -0.08
NCDN-203ENST00000373253 BLOC1S4Q9NUP1 217 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 CDC23Q9UJX2 597 aa14.55□□□□□ -0.08
NCDN-203ENST00000373253 FAM237AA0A1B0GTK4 181 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 ATP1A1P05023 1023 aaKnown RBP14.54□□□□□ -0.08
NCDN-203ENST00000373253 EHHADHQ08426 723 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 KCNA1Q09470 495 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 SFMBT2Q5VUG0 894 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 TTI2Q6NXR4 508 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 NAA15Q9BXJ9 866 aaKnown RBP14.54□□□□□ -0.08
NCDN-203ENST00000373253 LUC7LQ9NQ29 371 aaKnown RBP14.54□□□□□ -0.08
NCDN-203ENST00000373253 COL4A3BPQ9Y5P4 624 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 TRIM14Q14142 442 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 SLC9C1Q4G0N8 1177 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 MIER3Q7Z3K6 550 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 CATSPER3Q86XQ3 398 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 THAP9Q9H5L6 903 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 ZNF70Q9UC06 446 aaPredicted RBP14.54□□□□□ -0.08
NCDN-203ENST00000373253 STK17AQ9UEE5 414 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 LIMA1Q9UHB6 759 aaKnown RBP14.54□□□□□ -0.08
NCDN-203ENST00000373253 NUP188Q5SRE5 1749 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 TRIM49P0CI25 452 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 TRIM49CP0CI26 452 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 MYBP10242 640 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 POLD1P28340 1107 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 GJC1P36383 396 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 JAG1P78504 1218 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 MAN2A1Q16706 1144 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 SH3BP5LQ7L8J4 393 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 ZDHHC15Q96MV8 337 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 DUSP9Q99956 384 aaKnown RBP14.54□□□□□ -0.08
NCDN-203ENST00000373253 PAGR1Q9BTK6 254 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 GAKO14976 1311 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 ADAMTS7Q9UKP4 1686 aa14.54□□□□□ -0.08
NCDN-203ENST00000373253 FAM86B1E9PN63 330 aa14.53□□□□□ -0.08
NCDN-203ENST00000373253 EPHB6O15197 1021 aa14.53□□□□□ -0.08
NCDN-203ENST00000373253 FAM86B2P0C5J1 330 aa14.53□□□□□ -0.08
NCDN-203ENST00000373253 EPB41P11171 864 aaKnown RBP14.53□□□□□ -0.08
NCDN-203ENST00000373253 KIF11P52732 1056 aa14.53□□□□□ -0.08
NCDN-203ENST00000373253 CHORDC1Q9UHD1 332 aaPredicted RBP14.53□□□□□ -0.08
NCDN-203ENST00000373253 EFCAB8A8MWE9 144 aa14.53□□□□□ -0.08
NCDN-203ENST00000373253 FAM102BQ5T8I3 360 aa14.53□□□□□ -0.08
NCDN-203ENST00000373253 GJB7Q6PEY0 223 aa14.53□□□□□ -0.08
NCDN-203ENST00000373253 IRF2BP1Q8IU81 584 aa14.53□□□□□ -0.08
NCDN-203ENST00000373253 SUPT20HQ8NEM7 779 aa14.53□□□□□ -0.08
NCDN-203ENST00000373253 REEP2Q9BRK0 252 aa14.53□□□□□ -0.08
NCDN-203ENST00000373253 BCCIPQ9P287 314 aaKnown RBP eCLIP14.53□□□□□ -0.08
NCDN-203ENST00000373253 PHLPP2Q6ZVD8 1323 aa14.53□□□□□ -0.08
NCDN-203ENST00000373253 KLRC4O43908 158 aa14.53□□□□□ -0.08
NCDN-203ENST00000373253 DHX37Q8IY37 1157 aaKnown RBP14.53□□□□□ -0.08
NCDN-203ENST00000373253 NOA1Q8NC60 698 aaKnown RBP14.53□□□□□ -0.08
NCDN-203ENST00000373253 U2AF1L4Q8WU68 220 aaKnown RBP14.53□□□□□ -0.08
NCDN-203ENST00000373253 HAS1Q92839 578 aa14.53□□□□□ -0.08
NCDN-203ENST00000373253 K7ENM7 598 aa14.52□□□□□ -0.08
NCDN-203ENST00000373253 OAS2P29728 719 aaKnown RBP14.52□□□□□ -0.08
NCDN-203ENST00000373253 ZBED6P86452 979 aa14.52□□□□□ -0.08
NCDN-203ENST00000373253 ASIC2Q16515 512 aa14.52□□□□□ -0.08
NCDN-203ENST00000373253 ARHGAP27Q6ZUM4 889 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms