RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ELOA2Q8IYF1 753 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-204ENST00000372246 FUKQ8N0W3 1084 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 UBLCP1Q8WVY7 318 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-204ENST00000372246 NUDT12Q9BQG2 462 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 TACO1Q9BSH4 297 aaKnown RBP5.97□□□□□ -1.45
ATG4A-204ENST00000372246 VAT1LQ9HCJ6 419 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 MLXIPLQ9NP71 852 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 CHORDC1Q9UHD1 332 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-204ENST00000372246 ADAMTS1Q9UHI8 967 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 TRIM33Q9UPN9 1127 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 CNTNAP5Q8WYK1 1306 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 ABCC12Q96J65 1359 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 TLDC2A0PJX2 215 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 PSMA7O14818 248 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 DAPK3O43293 454 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 OATP04181 439 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 SHBGP04278 402 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 CLTAP09496 248 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 ECHS1P30084 290 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 NF2P35240 595 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 IFNAR2P48551 515 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 DNM2P50570 870 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 CLNS1AP54105 237 aaKnown RBP5.97□□□□□ -1.45
ATG4A-204ENST00000372246 MAGOHP61326 146 aaKnown RBP5.97□□□□□ -1.45
ATG4A-204ENST00000372246 SPAG1Q07617 926 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 ADCY1Q08828 1119 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 MAP3K12Q12852 859 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 LETM2Q2VYF4 491 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 CCDC38Q502W7 563 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 HIBCHQ6NVY1 386 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-204ENST00000372246 KDM7AQ6ZMT4 941 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 HEATR3Q7Z4Q2 680 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 PNMA8AQ86V59 439 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-204ENST00000372246 NELFCDQ8IXH7 590 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 PARP9Q8IXQ6 854 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 KIF2BQ8N4N8 673 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 ZBTB38Q8NAP3 1195 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-204ENST00000372246 SLC44A5Q8NCS7 719 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 RAPGEF5Q92565 580 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 MAGOHBQ96A72 148 aaKnown RBP5.97□□□□□ -1.45
ATG4A-204ENST00000372246 FERMT2Q96AC1 680 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 DYNLL2Q96FJ2 89 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 ATP6V1G3Q96LB4 118 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 RNF26Q9BY78 433 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-204ENST00000372246 IKZF4Q9H2S9 585 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 AKAP11Q9UKA4 1901 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 TJP1Q07157 1748 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 A0A087X0T9 212 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 KCNK3O14649 394 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 FAM228BP0C875 321 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 UBA7P41226 1012 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 PAFAH1B1P43034 410 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 SLCO1A2P46721 670 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 POLR2FP61218 127 aaKnown RBP5.96□□□□□ -1.45
ATG4A-204ENST00000372246 MAP2K1Q02750 393 aaPredicted RBP5.96□□□□□ -1.45
ATG4A-204ENST00000372246 ZNF844Q08AG5 666 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 MYO1EQ12965 1108 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 TRIM14Q14142 442 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 AADACL2Q6P093 401 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 C6orf89Q6UWU4 347 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 CCDC121Q6ZUS5 278 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 TMTC3Q6ZXV5 915 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 KCNK18Q7Z418 384 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 CATIPQ7Z7H3 387 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 TBC1D1Q86TI0 1168 aaPredicted RBP5.96□□□□□ -1.45
ATG4A-204ENST00000372246 SPICE1Q8N0Z3 855 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 THEMISQ8N1K5 641 aaPredicted RBP5.96□□□□□ -1.45
ATG4A-204ENST00000372246 TRIM58Q8NG06 486 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 NOC3LQ8WTT2 800 aaKnown RBP5.96□□□□□ -1.45
ATG4A-204ENST00000372246 TBC1D5Q92609 795 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 P2RX5Q93086 422 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 SEC16BQ96JE7 1060 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 PHOX2BQ99453 314 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 TRIM51Q9BSJ1 452 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 FAM167BQ9BTA0 163 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 TMEM260Q9NX78 707 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 AMACRQ9UHK6 382 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 FBXL5Q9UKA1 691 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 PNMA2Q9UL42 364 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 ZBTB1Q9Y2K1 713 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 CD2APQ9Y5K6 639 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 KAT6BQ8WYB5 2073 aa5.96□□□□□ -1.45
ATG4A-204ENST00000372246 SIPA1L3O60292 1781 aaPredicted RBP5.96□□□□□ -1.45
ATG4A-204ENST00000372246 DDX60Q8IY21 1712 aaKnown RBP5.96□□□□□ -1.46
ATG4A-204ENST00000372246 LAMB4A4D0S4 1761 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.96□□□□□ -1.46
ATG4A-204ENST00000372246 NPHP3-ACAD11A0A0J9YXS1 232 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 CCDC196A0A1B0GTZ2 297 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 ANO9A1A5B4 782 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 USP17L3A6NCW0 530 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 USP17L4A6NCW7 530 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 ENO4A6NNW6 628 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 F8W031 263 aaPredicted RBP5.96□□□□□ -1.46
ATG4A-204ENST00000372246 CHUKO15111 745 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 PRPF3O43395 683 aaKnown RBP5.96□□□□□ -1.46
ATG4A-204ENST00000372246 CEP104O60308 925 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 FAM107AO95990 144 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 SCG2P13521 617 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 MCM3P25205 808 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 ARID4AP29374 1257 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms