RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 CD99L2Q8TCZ2 262 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 PARD3BQ8TEW8 1205 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 DPF3Q92784 378 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 TRERF1Q96PN7 1200 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 PHOX2BQ99453 314 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 COA1Q9GZY4 146 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 GGNBP2Q9H3C7 697 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 TSPY26PQ9H489 355 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 PDRG1Q9NUG6 133 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 LMBRD1Q9NUN5 540 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 PIH1D1Q9NWS0 290 aaKnown RBP5.64□□□□□ -1.51
UBE3D-202ENST00000369746 NOVA2Q9UNW9 492 aaKnown RBP5.64□□□□□ -1.51
UBE3D-202ENST00000369746 COG5Q9UP83 839 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 ATP8A1Q9Y2Q0 1164 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 PTCH2Q9Y6C5 1203 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 COL11A1P12107 1806 aaPredicted RBP5.64□□□□□ -1.51
UBE3D-202ENST00000369746 USP17L3A6NCW0 530 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 USP17L4A6NCW7 530 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 PRR33A8MZF0 331 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 ZSCAN9O15535 394 aaPredicted RBP5.64□□□□□ -1.51
UBE3D-202ENST00000369746 XPOTO43592 962 aaKnown RBP5.64□□□□□ -1.51
UBE3D-202ENST00000369746 TIPRLO75663 272 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 NEBLO76041 1014 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 ARIH2O95376 493 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 CYP2E1P05181 493 aaPredicted RBP5.64□□□□□ -1.51
UBE3D-202ENST00000369746 FDX1P10109 184 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 CCL5P13501 91 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 FCGRTP55899 365 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 ROR1Q01973 937 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 G3BP1Q13283 466 aaKnown RBP eCLIP5.64□□□□□ -1.51
UBE3D-202ENST00000369746 SERINC3Q13530 473 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 C20orf194Q5TEA3 1177 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 USP17L1Q7RTZ2 530 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 KIAA0825Q8IV33 1275 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 UBR7Q8N806 425 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 DTNBP1Q96EV8 351 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 MS4A4AQ96JQ5 239 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 ALPK1Q96QP1 1244 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 ITGB1BP2Q9UKP3 347 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 KCNH4Q9UQ05 1017 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 TMEM98Q9Y2Y6 226 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.64□□□□□ -1.51
UBE3D-202ENST00000369746 CCDC171Q6TFL3 1326 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 EIF3FO00303 357 aaPredicted RBP5.63□□□□□ -1.51
UBE3D-202ENST00000369746 CPLX1O14810 134 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 ECE2O60344 883 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 MSCO60682 206 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 RLBP1P12271 317 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 GPTP24298 496 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 CRHR2Q13324 411 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 WASHC4Q2M389 1173 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 TUBB8Q3ZCM7 444 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 SFMBT2Q5VUG0 894 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 RSAD2Q8WXG1 361 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 RABGGTAQ92696 567 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 CDK5RAP3Q96JB5 506 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 ZMAT2Q96NC0 199 aaKnown RBP5.63□□□□□ -1.51
UBE3D-202ENST00000369746 SCLT1Q96NL6 688 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.63□□□□□ -1.51
UBE3D-202ENST00000369746 DESI2Q9BSY9 194 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 LIMD1Q9UGP4 676 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 LOC285556D6RIA3 1793 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 FRMPD3Q5JV73 1810 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 C2orf81A6NN90 581 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 CHUKO15111 745 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 KATNA1O75449 491 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 NR1I2O75469 434 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 PNMA6AP0CW24 399 aaPredicted RBP5.63□□□□□ -1.51
UBE3D-202ENST00000369746 VARSP26640 1264 aaKnown RBP5.63□□□□□ -1.51
UBE3D-202ENST00000369746 HSPA4P34932 840 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 CLK2P49760 499 aaKnown RBP5.63□□□□□ -1.51
UBE3D-202ENST00000369746 PDE4BQ07343 736 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 TEFQ10587 303 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 MUM1Q2TAK8 710 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 HHATQ5VTY9 493 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 CCDC65Q8IXS2 484 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 MAB21L3Q8N8X9 362 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 NAT8LQ8N9F0 302 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 RBM18Q96H35 190 aaKnown RBP5.63□□□□□ -1.51
UBE3D-202ENST00000369746 ASB16Q96NS5 453 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 ASB2Q96Q27 587 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 ALG1Q9BT22 464 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 LMCD1Q9NZU5 365 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 THEGQ9P2T0 379 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 TMX2Q9Y320 296 aa5.63□□□□□ -1.51
UBE3D-202ENST00000369746 ADM5C9JUS6 153 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 KLHL41O60662 606 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 GFPT2O94808 682 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 RTN3O95197 1032 aaPredicted RBP5.62□□□□□ -1.51
UBE3D-202ENST00000369746 F2P00734 622 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 HNRNPCP07910 306 aaKnown RBP eCLIP5.62□□□□□ -1.51
UBE3D-202ENST00000369746 HARSP12081 509 aaKnown RBP5.62□□□□□ -1.51
UBE3D-202ENST00000369746 GZMAP12544 262 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 MCM2P49736 904 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 CLDN10P78369 228 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 SNX17Q15036 470 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 IQCB1Q15051 598 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 VWA3BQ502W6 1294 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 HIBCHQ6NVY1 386 aaPredicted RBP5.62□□□□□ -1.51
UBE3D-202ENST00000369746 FBXO38Q6PIJ6 1188 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms