RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 BTBD18B2RXH4 712 aa10□□□□□ -0.81
SNX27-201ENST00000368838 STXBP3O00186 592 aa10□□□□□ -0.81
SNX27-201ENST00000368838 LAD1O00515 517 aa10□□□□□ -0.81
SNX27-201ENST00000368838 C6orf222P0C671 652 aaPredicted RBP10□□□□□ -0.81
SNX27-201ENST00000368838 RAG1P15918 1043 aa10□□□□□ -0.81
SNX27-201ENST00000368838 COPB2P35606 906 aa10□□□□□ -0.81
SNX27-201ENST00000368838 SLC1A4P43007 532 aa10□□□□□ -0.81
SNX27-201ENST00000368838 ACLYP53396 1101 aa10□□□□□ -0.81
SNX27-201ENST00000368838 KCNA10Q16322 511 aa10□□□□□ -0.81
SNX27-201ENST00000368838 CCDC144BQ3MJ40 725 aa10□□□□□ -0.81
SNX27-201ENST00000368838 ZNF697Q5TEC3 545 aa10□□□□□ -0.81
SNX27-201ENST00000368838 ARL6IP4Q66PJ3 421 aaKnown RBP10□□□□□ -0.81
SNX27-201ENST00000368838 RBM43Q6ZSC3 357 aaKnown RBP10□□□□□ -0.81
SNX27-201ENST00000368838 FAM160B2Q86V87 743 aa10□□□□□ -0.81
SNX27-201ENST00000368838 BLIDQ8IZY5 108 aa10□□□□□ -0.81
SNX27-201ENST00000368838 VTI1AQ96AJ9 217 aa10□□□□□ -0.81
SNX27-201ENST00000368838 PCMTD1Q96MG8 357 aaPredicted RBP10□□□□□ -0.81
SNX27-201ENST00000368838 C6orf50Q9HD87 102 aa10□□□□□ -0.81
SNX27-201ENST00000368838 STARD7Q9NQZ5 370 aa10□□□□□ -0.81
SNX27-201ENST00000368838 DDX19AQ9NUU7 478 aaKnown RBP10□□□□□ -0.81
SNX27-201ENST00000368838 TMEM39AQ9NV64 488 aa10□□□□□ -0.81
SNX27-201ENST00000368838 CDKN2AIPQ9NXV6 580 aaPredicted RBP10□□□□□ -0.81
SNX27-201ENST00000368838 FEM1BQ9UK73 627 aa10□□□□□ -0.81
SNX27-201ENST00000368838 FAM184BQ9ULE4 1060 aa10□□□□□ -0.81
SNX27-201ENST00000368838 NOL7Q9UMY1 257 aaKnown RBP10□□□□□ -0.81
SNX27-201ENST00000368838 PRUNE2Q8WUY3 3088 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 KIAA1217Q5T5P2 1943 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.99□□□□□ -0.81
SNX27-201ENST00000368838 SPTLC2O15270 562 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 FIBPO43427 364 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 ALAS1P13196 640 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 CMA1P23946 247 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 TOB1P50616 345 aaPredicted RBP9.99□□□□□ -0.81
SNX27-201ENST00000368838 BEX3Q00994 111 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 ACVR2BQ13705 512 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 AXDND1Q5T1B0 1012 aaPredicted RBP9.99□□□□□ -0.81
SNX27-201ENST00000368838 TMEM63BQ5T3F8 832 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 WWC2Q6AWC2 1192 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 ARMCX2Q7L311 632 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 EEPD1Q7L9B9 569 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 KRT25Q7Z3Z0 450 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 CMTR1Q8N1G2 835 aaKnown RBP9.99□□□□□ -0.81
SNX27-201ENST00000368838 CCDC82Q8N4S0 544 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 CHURC1Q8WUH1 139 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 MYLIPQ8WY64 445 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 PGBD1Q96JS3 809 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 RNPC3Q96LT9 517 aaKnown RBP9.99□□□□□ -0.81
SNX27-201ENST00000368838 TIGD1Q96MW7 591 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 PURBQ96QR8 312 aaKnown RBP9.99□□□□□ -0.81
SNX27-201ENST00000368838 GJB4Q9NTQ9 266 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 RNF146Q9NTX7 359 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 MAP3K20Q9NYL2 800 aaKnown RBP9.99□□□□□ -0.81
SNX27-201ENST00000368838 VPS54Q9P1Q0 977 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 NRBP1Q9UHY1 535 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 MYH15Q9Y2K3 1946 aa9.99□□□□□ -0.81
SNX27-201ENST00000368838 ZNF536O15090 1300 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 SYNGAP1Q96PV0 1343 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 FSD2A1L4K1 749 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 SOWAHBA6NEL2 793 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 A6NJR5 290 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 PIK3CDO00329 1044 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 ATP2A1O14983 1001 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 KIAA0355O15063 1070 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 CTAGE5O15320 804 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 PRPHP41219 470 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 CLK2P49760 499 aaKnown RBP9.98□□□□□ -0.81
SNX27-201ENST00000368838 STAT2P52630 851 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 MRPL12P52815 198 aaKnown RBP9.98□□□□□ -0.81
SNX27-201ENST00000368838 NLRP5P59047 1200 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 GUCY1B3Q02153 619 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 FAAP100Q0VG06 881 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 MCM6Q14566 821 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 CCDC96Q2M329 555 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 MUM1L1Q5H9M0 696 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 FOXD4L5Q5VV16 416 aaPredicted RBP9.98□□□□□ -0.81
SNX27-201ENST00000368838 ASTLQ6HA08 431 aaPredicted RBP9.98□□□□□ -0.81
SNX27-201ENST00000368838 TYW1BQ6NUM6 668 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 FAM173BQ6P4H8 233 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 MOXD1Q6UVY6 613 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 MAMDC4Q6UXC1 1216 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 ADGRF4Q8IZF3 695 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 KLHDC9Q8NEP7 349 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 ENGASEQ8NFI3 743 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 FOXD4L4Q8WXT5 416 aaPredicted RBP9.98□□□□□ -0.81
SNX27-201ENST00000368838 PIGSQ96S52 555 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 CDX2Q99626 313 aaPredicted RBP9.98□□□□□ -0.81
SNX27-201ENST00000368838 NAP1L4Q99733 375 aaKnown RBP9.98□□□□□ -0.81
SNX27-201ENST00000368838 TTYH1Q9H313 450 aaPredicted RBP9.98□□□□□ -0.81
SNX27-201ENST00000368838 RIC8AQ9NPQ8 531 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 A1CFQ9NQ94 594 aaKnown RBP9.98□□□□□ -0.81
SNX27-201ENST00000368838 KCNJ14Q9UNX9 436 aa9.98□□□□□ -0.81
SNX27-201ENST00000368838 BAZ2BQ9UIF8 2168 aaKnown RBP9.97□□□□□ -0.81
SNX27-201ENST00000368838 ASTN1O14525 1302 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 GOLGA6L4A6NEF3 574 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 DCDC2CA8MYV0 355 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 CUTAO60888 179 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 GADD45BO75293 160 aaPredicted RBP9.97□□□□□ -0.81
SNX27-201ENST00000368838 DUSP11O75319 330 aaKnown RBP9.97□□□□□ -0.81
SNX27-201ENST00000368838 CAVIN2O95810 425 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 ASGR1P07306 291 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms