RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 POTEBQ6S5H4 581 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 SPICE1Q8N0Z3 855 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 SPAG5Q96R06 1193 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 PYM1Q9BRP8 204 aaKnown RBP9.8□□□□□ -0.84
THBS3-201ENST00000368378 DPH5Q9H2P9 285 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 CEP104O60308 925 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 ONECUT3O60422 494 aaPredicted RBP9.79□□□□□ -0.84
THBS3-201ENST00000368378 BAG3O95817 575 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 GLI1P08151 1106 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 EEF1GP26641 437 aaKnown RBP9.79□□□□□ -0.84
THBS3-201ENST00000368378 RFC4P35249 363 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 TRIM14Q14142 442 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 MIIPQ5JXC2 388 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 CCDC113Q9H0I3 377 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 BARHL2Q9NY43 387 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 RTCBQ9Y3I0 505 aaKnown RBP9.79□□□□□ -0.84
THBS3-201ENST00000368378 PCDHB13Q9Y5F0 798 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 A0A1B0GUL6 1792 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 TLDC2A0PJX2 215 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 TMEM110-MUSTN1A8MSY1 372 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 HSF2BPO75031 334 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 RASA1P20936 1047 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 KLRC1P26715 233 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 MNAT1P51948 309 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 VAV2P52735 878 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 CKAP4Q07065 602 aaKnown RBP9.79□□□□□ -0.84
THBS3-201ENST00000368378 VWA3BQ502W6 1294 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 TPTE2Q6XPS3 522 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 CCNI2Q6ZMN8 369 aaPredicted RBP9.79□□□□□ -0.84
THBS3-201ENST00000368378 ZNF507Q8TCN5 953 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 CAPS2Q9BXY5 557 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 UBXN6Q9BZV1 441 aa9.79□□□□□ -0.84
THBS3-201ENST00000368378 PDS5AQ29RF7 1337 aaKnown RBP9.79□□□□□ -0.84
THBS3-201ENST00000368378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.78□□□□□ -0.84
THBS3-201ENST00000368378 BICDL2A1A5D9 508 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 POTEFA5A3E0 1075 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 AGPSO00116 658 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 POTEIP0CG38 1075 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 USP8P40818 1118 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 ZYXQ15942 572 aaKnown RBP9.78□□□□□ -0.84
THBS3-201ENST00000368378 TMEM266Q2M3C6 531 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 CNNM4Q6P4Q7 775 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 POTEGQ6S5H5 508 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 POTEEQ6S8J3 1075 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 CLEC4GQ6UXB4 293 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 DNAJC7Q99615 494 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 PCDHAC2Q9Y5I4 1007 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 PSMD14O00487 310 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 EBAG9O00559 213 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 RHOBTB3O94955 611 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 IVLP07476 585 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 KLHL30Q0D2K2 578 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 CEP85LQ5SZL2 805 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 NRAPQ86VF7 1730 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 CREG2Q8IUH2 290 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 UBLCP1Q8WVY7 318 aaPredicted RBP9.78□□□□□ -0.84
THBS3-201ENST00000368378 UPF1Q92900 1129 aaKnown RBP eCLIP9.78□□□□□ -0.84
THBS3-201ENST00000368378 DDX47Q9H0S4 455 aaKnown RBP9.78□□□□□ -0.84
THBS3-201ENST00000368378 KBTBD4Q9NVX7 518 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 SNX12Q9UMY4 172 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 USP17L10C9JJH3 530 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 PRPF6O94906 941 aaKnown RBP9.78□□□□□ -0.84
THBS3-201ENST00000368378 AKR1B1P15121 316 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 HOXA13P31271 388 aaPredicted RBP9.78□□□□□ -0.84
THBS3-201ENST00000368378 AMPD3Q01432 767 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 ADCY1Q08828 1119 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 GRM4Q14833 912 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 DGKHQ86XP1 1220 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 RPGRQ92834 1020 aaKnown RBP9.78□□□□□ -0.84
THBS3-201ENST00000368378 MMTAG2Q9BU76 263 aaKnown RBP9.78□□□□□ -0.84
THBS3-201ENST00000368378 THAP9Q9H5L6 903 aa9.78□□□□□ -0.84
THBS3-201ENST00000368378 BUB1BO60566 1050 aaPredicted RBP9.77□□□□□ -0.85
THBS3-201ENST00000368378 SLC9A1P19634 815 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 POLD1P28340 1107 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 GNA11P29992 359 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 GRB10Q13322 594 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 NNTQ13423 1086 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 NBPF20Q3BBV1 942 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 PRR16Q569H4 304 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 CFAP58Q5T655 872 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 TRIM58Q8NG06 486 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 ZIM3Q96PE6 472 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 ANKRD2Q9GZV1 360 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 YY1AP1Q9H869 796 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 PANK4Q9NVE7 773 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.77□□□□□ -0.85
THBS3-201ENST00000368378 A0A087X0T9 212 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 SHTN1A0MZ66 631 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 DDX39AO00148 427 aaKnown RBP9.77□□□□□ -0.85
THBS3-201ENST00000368378 FAM228BP0C875 321 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 TMOD1P28289 359 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 DHX9Q08211 1270 aaKnown RBP9.77□□□□□ -0.85
THBS3-201ENST00000368378 KCNA1Q09470 495 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 SBK1Q52WX2 424 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 GPBP1Q86WP2 473 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 FAM114A1Q8IWE2 563 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 ZNF513Q8N8E2 541 aaPredicted RBP9.77□□□□□ -0.85
THBS3-201ENST00000368378 HNRNPLLQ8WVV9 542 aaKnown RBP9.77□□□□□ -0.85
THBS3-201ENST00000368378 ZBTB21Q9ULJ3 1066 aa9.77□□□□□ -0.85
THBS3-201ENST00000368378 PCDHA12Q9UN75 941 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms