RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 ESYT2A0FGR8 921 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 GGPS1O95749 300 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 CD4P01730 458 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 MMP3P08254 477 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 SUPT20HL2P0C7V6 817 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 CLK2P49760 499 aaKnown RBP11.28□□□□□ -0.6
CD48-202ENST00000368046 AK2P54819 239 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 PSMC6P62333 389 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 MDM2Q00987 491 aaPredicted RBP11.28□□□□□ -0.6
CD48-202ENST00000368046 PTPN11Q06124 597 aaPredicted RBP11.28□□□□□ -0.6
CD48-202ENST00000368046 AP3B2Q13367 1082 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 NBPF20Q3BBV1 942 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 C8orf34Q49A92 452 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 FAM126BQ8IXS8 530 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 TRIM22Q8IYM9 498 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 GIMAP8Q8ND71 665 aaPredicted RBP11.28□□□□□ -0.6
CD48-202ENST00000368046 PPTC7Q8NI37 304 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 BADQ92934 168 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 GPRASP2Q96D09 838 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 CDHR1Q96JP9 859 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 SPATA33Q96N06 139 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 UBE2OQ9C0C9 1292 aaKnown RBP11.28□□□□□ -0.6
CD48-202ENST00000368046 SLKQ9H2G2 1235 aaPredicted RBP11.28□□□□□ -0.6
CD48-202ENST00000368046 SH3GLB2Q9NR46 395 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 TPCN1Q9ULQ1 816 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 UBIAD1Q9Y5Z9 338 aa11.28□□□□□ -0.6
CD48-202ENST00000368046 MCM3APO60318 1980 aa11.27□□□□□ -0.61
CD48-202ENST00000368046 PFKFB2O60825 505 aa11.27□□□□□ -0.61
CD48-202ENST00000368046 PPFIA3O75145 1194 aa11.27□□□□□ -0.61
CD48-202ENST00000368046 DEXIO95424 95 aa11.27□□□□□ -0.61
CD48-202ENST00000368046 TIMP1P01033 207 aa11.27□□□□□ -0.61
CD48-202ENST00000368046 UBA1P22314 1058 aaKnown RBP11.27□□□□□ -0.61
CD48-202ENST00000368046 ITGB8P26012 769 aa11.27□□□□□ -0.61
CD48-202ENST00000368046 SCRN1Q12765 414 aa11.27□□□□□ -0.61
CD48-202ENST00000368046 HSDL1Q3SXM5 330 aa11.27□□□□□ -0.61
CD48-202ENST00000368046 NFRKBQ6P4R8 1299 aa11.27□□□□□ -0.61
CD48-202ENST00000368046 BICD2Q8TD16 824 aa11.27□□□□□ -0.61
CD48-202ENST00000368046 MXRA8Q9BRK3 442 aa11.27□□□□□ -0.61
CD48-202ENST00000368046 BCAS3Q9H6U6 928 aa11.27□□□□□ -0.61
CD48-202ENST00000368046 JADE2Q9NQC1 790 aa11.27□□□□□ -0.61
CD48-202ENST00000368046 DNAH12Q6ZR08 3092 aa11.27□□□□□ -0.61
CD48-202ENST00000368046 ATP9AO75110 1047 aa11.26□□□□□ -0.61
CD48-202ENST00000368046 HOXD8P13378 290 aaPredicted RBP11.26□□□□□ -0.61
CD48-202ENST00000368046 ITGB5P18084 799 aa11.26□□□□□ -0.61
CD48-202ENST00000368046 SEMA3FQ13275 785 aa11.26□□□□□ -0.61
CD48-202ENST00000368046 JAKMIP3Q5VZ66 844 aa11.26□□□□□ -0.61
CD48-202ENST00000368046 METTL7BQ6UX53 244 aa11.26□□□□□ -0.61
CD48-202ENST00000368046 CYFIP1Q7L576 1253 aa11.26□□□□□ -0.61
CD48-202ENST00000368046 TDHQ8IZJ6 230 aa11.26□□□□□ -0.61
CD48-202ENST00000368046 CCDC148Q8NFR7 591 aa11.26□□□□□ -0.61
CD48-202ENST00000368046 KAT2BQ92831 832 aa11.26□□□□□ -0.61
CD48-202ENST00000368046 ANO3Q9BYT9 981 aa11.26□□□□□ -0.61
CD48-202ENST00000368046 TRPV6Q9H1D0 765 aa11.26□□□□□ -0.61
CD48-202ENST00000368046 TMEM260Q9NX78 707 aa11.26□□□□□ -0.61
CD48-202ENST00000368046 TBX21Q9UL17 535 aa11.26□□□□□ -0.61
CD48-202ENST00000368046 MYH6P13533 1939 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 HAS3O00219 553 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 MEIS1O00470 390 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 SORBS3O60504 671 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 B4GALT4O60513 344 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 CDKL5O76039 1030 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 CYP3A4P08684 503 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 ZNF76P36508 570 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 SREBF1P36956 1147 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 NLRP5P59047 1200 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
CD48-202ENST00000368046 MTMR1Q13613 665 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 ME3Q16798 604 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 CEP55Q53EZ4 464 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 FAM47CQ5HY64 1035 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 MFSD5Q6N075 450 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 FAM177A1Q8N128 213 aaPredicted RBP11.25□□□□□ -0.61
CD48-202ENST00000368046 PGBD1Q96JS3 809 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 KATNAL1Q9BW62 490 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 C22orf23Q9BZE7 217 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 KCNH7Q9NS40 1196 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 VPS54Q9P1Q0 977 aa11.25□□□□□ -0.61
CD48-202ENST00000368046 LRRC37A2A6NM11 1700 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 NOP56O00567 594 aaKnown RBP11.24□□□□□ -0.61
CD48-202ENST00000368046 F2P00734 622 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 KCNA2P16389 499 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 PSEN2P49810 448 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 CHMP4BP1P59074 171 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 ARHGAP4P98171 946 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 GALNT17Q6IS24 598 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 NIPA1Q7RTP0 329 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 SESTD1Q86VW0 696 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 REXO1Q8N1G1 1221 aaKnown RBP11.24□□□□□ -0.61
CD48-202ENST00000368046 TMEM199Q8N511 208 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 C7orf31Q8N865 590 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 CYP2W1Q8TAV3 490 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 CRYGNQ8WXF5 182 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 SEPT1Q8WYJ6 367 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 GPR20Q99678 358 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 C16orf70Q9BSU1 422 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 HIPK3Q9H422 1215 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 TRMT13Q9NUP7 481 aaKnown RBP11.24□□□□□ -0.61
CD48-202ENST00000368046 ALPK3Q96L96 1907 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 CEP290O15078 2479 aa11.24□□□□□ -0.61
CD48-202ENST00000368046 H3BRB1 525 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms