RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 CPT1AP50416 773 aa16.78■□□□□ 0.28
SF3B5-201ENST00000367569 SSRP1Q08945 709 aaKnown RBP16.78■□□□□ 0.28
SF3B5-201ENST00000367569 ST3GAL1Q11201 340 aa16.78■□□□□ 0.28
SF3B5-201ENST00000367569 PCNX4Q63HM2 1172 aa16.78■□□□□ 0.28
SF3B5-201ENST00000367569 TRIM22Q8IYM9 498 aa16.78■□□□□ 0.28
SF3B5-201ENST00000367569 ZNF713Q8N859 430 aaPredicted RBP16.78■□□□□ 0.28
SF3B5-201ENST00000367569 HERVK_113Q902F9 699 aa16.78■□□□□ 0.28
SF3B5-201ENST00000367569 IL17RAQ96F46 866 aa16.78■□□□□ 0.28
SF3B5-201ENST00000367569 KIF2CQ99661 725 aa16.78■□□□□ 0.28
SF3B5-201ENST00000367569 GJB4Q9NTQ9 266 aa16.78■□□□□ 0.28
SF3B5-201ENST00000367569 TRMT13Q9NUP7 481 aaKnown RBP16.78■□□□□ 0.28
SF3B5-201ENST00000367569 NKRFO15226 690 aaKnown RBP eCLIP16.77■□□□□ 0.28
SF3B5-201ENST00000367569 PFKFB2O60825 505 aa16.77■□□□□ 0.28
SF3B5-201ENST00000367569 CTDNEP1O95476 244 aa16.77■□□□□ 0.28
SF3B5-201ENST00000367569 FGBP02675 491 aa16.77■□□□□ 0.28
SF3B5-201ENST00000367569 FAM47CQ5HY64 1035 aa16.77■□□□□ 0.28
SF3B5-201ENST00000367569 OTOP2Q7RTS6 562 aa16.77■□□□□ 0.28
SF3B5-201ENST00000367569 DHX37Q8IY37 1157 aaKnown RBP16.77■□□□□ 0.28
SF3B5-201ENST00000367569 VWCEQ96DN2 955 aa16.77■□□□□ 0.28
SF3B5-201ENST00000367569 SCLYQ96I15 445 aa16.77■□□□□ 0.28
SF3B5-201ENST00000367569 INPP4AQ96PE3 977 aaPredicted RBP16.77■□□□□ 0.28
SF3B5-201ENST00000367569 TANC1Q9C0D5 1861 aa16.76■□□□□ 0.27
SF3B5-201ENST00000367569 EIF5BO60841 1220 aaKnown RBP16.76■□□□□ 0.27
SF3B5-201ENST00000367569 CYP2C9P11712 490 aa16.76■□□□□ 0.27
SF3B5-201ENST00000367569 ITGB5P18084 799 aa16.76■□□□□ 0.27
SF3B5-201ENST00000367569 CLK2P49760 499 aaKnown RBP16.76■□□□□ 0.27
SF3B5-201ENST00000367569 ANKRD1Q15327 319 aa16.76■□□□□ 0.27
SF3B5-201ENST00000367569 GNPTABQ3T906 1256 aa16.76■□□□□ 0.27
SF3B5-201ENST00000367569 REXO1Q8N1G1 1221 aaKnown RBP16.76■□□□□ 0.27
SF3B5-201ENST00000367569 GTF3C6Q969F1 213 aa16.76■□□□□ 0.27
SF3B5-201ENST00000367569 SPATA33Q96N06 139 aa16.76■□□□□ 0.27
SF3B5-201ENST00000367569 MTG1Q9BT17 334 aaPredicted RBP16.76■□□□□ 0.27
SF3B5-201ENST00000367569 CHD9Q3L8U1 2897 aa16.76■□□□□ 0.27
SF3B5-201ENST00000367569 GBF1Q92538 1859 aa16.76■□□□□ 0.27
SF3B5-201ENST00000367569 A6NJR5 290 aa16.75■□□□□ 0.27
SF3B5-201ENST00000367569 FIBPO43427 364 aa16.75■□□□□ 0.27
SF3B5-201ENST00000367569 JAK2O60674 1132 aa16.75■□□□□ 0.27
SF3B5-201ENST00000367569 DEXIO95424 95 aa16.75■□□□□ 0.27
SF3B5-201ENST00000367569 NBPF20Q3BBV1 942 aa16.75■□□□□ 0.27
SF3B5-201ENST00000367569 HSDL1Q3SXM5 330 aa16.75■□□□□ 0.27
SF3B5-201ENST00000367569 CPLX2Q6PUV4 134 aaKnown RBP16.75■□□□□ 0.27
SF3B5-201ENST00000367569 CYFIP1Q7L576 1253 aa16.75■□□□□ 0.27
SF3B5-201ENST00000367569 TRIM50Q86XT4 487 aa16.75■□□□□ 0.27
SF3B5-201ENST00000367569 CCDC148Q8NFR7 591 aa16.75■□□□□ 0.27
SF3B5-201ENST00000367569 CYP2W1Q8TAV3 490 aa16.75■□□□□ 0.27
SF3B5-201ENST00000367569 C6orf50Q9HD87 102 aa16.75■□□□□ 0.27
SF3B5-201ENST00000367569 KCNJ14Q9UNX9 436 aa16.75■□□□□ 0.27
SF3B5-201ENST00000367569 SCN5AQ14524 2016 aa16.75■□□□□ 0.27
SF3B5-201ENST00000367569 TTC28Q96AY4 2481 aa16.75■□□□□ 0.27
SF3B5-201ENST00000367569 TRIP12Q14669 1992 aaPredicted RBP16.75■□□□□ 0.27
SF3B5-201ENST00000367569 ATP9AO75110 1047 aa16.74■□□□□ 0.27
SF3B5-201ENST00000367569 SUPT20HL2P0C7V6 817 aa16.74■□□□□ 0.27
SF3B5-201ENST00000367569 NLRP5P59047 1200 aa16.74■□□□□ 0.27
SF3B5-201ENST00000367569 BRDTQ58F21 947 aaPredicted RBP16.74■□□□□ 0.27
SF3B5-201ENST00000367569 CELF3Q5SZQ8 465 aaKnown RBP16.74■□□□□ 0.27
SF3B5-201ENST00000367569 MYSM1Q5VVJ2 828 aa16.74■□□□□ 0.27
SF3B5-201ENST00000367569 NLRX1Q86UT6 975 aa16.74■□□□□ 0.27
SF3B5-201ENST00000367569 CCDC83Q8IWF9 413 aa16.74■□□□□ 0.27
SF3B5-201ENST00000367569 RPUSD2Q8IZ73 545 aaKnown RBP16.74■□□□□ 0.27
SF3B5-201ENST00000367569 USP38Q8NB14 1042 aa16.74■□□□□ 0.27
SF3B5-201ENST00000367569 CCDC12Q8WUD4 166 aaPredicted RBP16.74■□□□□ 0.27
SF3B5-201ENST00000367569 ALG1Q9BT22 464 aa16.74■□□□□ 0.27
SF3B5-201ENST00000367569 ZMYND12Q9H0C1 365 aa16.74■□□□□ 0.27
SF3B5-201ENST00000367569 PRDM12Q9H4Q4 367 aa16.74■□□□□ 0.27
SF3B5-201ENST00000367569 EHMT1Q9H9B1 1298 aa16.74■□□□□ 0.27
SF3B5-201ENST00000367569 MLXIPQ9HAP2 919 aa16.74■□□□□ 0.27
SF3B5-201ENST00000367569 ESYT2A0FGR8 921 aa16.73■□□□□ 0.27
SF3B5-201ENST00000367569 SPATA31C2B4DYI2 1134 aa16.73■□□□□ 0.27
SF3B5-201ENST00000367569 SREBF1P36956 1147 aa16.73■□□□□ 0.27
SF3B5-201ENST00000367569 ARHGAP4P98171 946 aa16.73■□□□□ 0.27
SF3B5-201ENST00000367569 AP3B2Q13367 1082 aa16.73■□□□□ 0.27
SF3B5-201ENST00000367569 MTMR1Q13613 665 aa16.73■□□□□ 0.27
SF3B5-201ENST00000367569 RAB30Q15771 203 aa16.73■□□□□ 0.27
SF3B5-201ENST00000367569 MTIF3Q9H2K0 278 aaKnown RBP16.73■□□□□ 0.27
SF3B5-201ENST00000367569 NKX2-4Q9H2Z4 354 aa16.73■□□□□ 0.27
SF3B5-201ENST00000367569 MSRAQ9UJ68 235 aa16.73■□□□□ 0.27
SF3B5-201ENST00000367569 YBX2Q9Y2T7 364 aaKnown RBP16.73■□□□□ 0.27
SF3B5-201ENST00000367569 UBIAD1Q9Y5Z9 338 aa16.73■□□□□ 0.27
SF3B5-201ENST00000367569 STK36Q9NRP7 1315 aa16.72■□□□□ 0.27
SF3B5-201ENST00000367569 DDX39AO00148 427 aaKnown RBP16.72■□□□□ 0.27
SF3B5-201ENST00000367569 NOP56O00567 594 aaKnown RBP16.72■□□□□ 0.27
SF3B5-201ENST00000367569 KPNA6O60684 536 aa16.72■□□□□ 0.27
SF3B5-201ENST00000367569 CDKL5O76039 1030 aa16.72■□□□□ 0.27
SF3B5-201ENST00000367569 ARP10275 920 aa16.72■□□□□ 0.27
SF3B5-201ENST00000367569 ICAM3P32942 547 aa16.72■□□□□ 0.27
SF3B5-201ENST00000367569 RBM25P49756 843 aaKnown RBP16.72■□□□□ 0.27
SF3B5-201ENST00000367569 LAMC2Q13753 1193 aa16.72■□□□□ 0.27
SF3B5-201ENST00000367569 UTP14CQ5TAP6 766 aaKnown RBP16.72■□□□□ 0.27
SF3B5-201ENST00000367569 NFRKBQ6P4R8 1299 aa16.72■□□□□ 0.27
SF3B5-201ENST00000367569 NSUN7Q8NE18 718 aaKnown RBP16.72■□□□□ 0.27
SF3B5-201ENST00000367569 PPTC7Q8NI37 304 aa16.72■□□□□ 0.27
SF3B5-201ENST00000367569 KAT2BQ92831 832 aa16.72■□□□□ 0.27
SF3B5-201ENST00000367569 ORC3Q9UBD5 711 aaPredicted RBP16.72■□□□□ 0.27
SF3B5-201ENST00000367569 STAM2O75886 525 aa16.71■□□□□ 0.27
SF3B5-201ENST00000367569 CD2BP2O95400 341 aaKnown RBP16.71■□□□□ 0.27
SF3B5-201ENST00000367569 KCNA2P16389 499 aa16.71■□□□□ 0.27
SF3B5-201ENST00000367569 ZNF76P36508 570 aa16.71■□□□□ 0.27
SF3B5-201ENST00000367569 RABGGTBP53611 331 aa16.71■□□□□ 0.27
SF3B5-201ENST00000367569 ADGRE1Q14246 886 aa16.71■□□□□ 0.27
SF3B5-201ENST00000367569 DGKDQ16760 1214 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms