RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 CACTINQ8WUQ7 758 aaKnown RBP9.64□□□□□ -0.87
SYNE1-209ENST00000367257 AATFQ9NY61 560 aaKnown RBP eCLIP9.64□□□□□ -0.87
SYNE1-209ENST00000367257 USP32Q8NFA0 1604 aa9.64□□□□□ -0.87
SYNE1-209ENST00000367257 ADGRL3Q9HAR2 1447 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 IQANK1A0A1B0GTG1 560 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 RASGRF2O14827 1237 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 ANXA13P27216 316 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 MAP3K7CLP57077 242 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 ZMYM1Q5SVZ6 1142 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 DPP8Q6V1X1 898 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 VSTM4Q8IW00 320 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 ZBTB38Q8NAP3 1195 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 DHX38Q92620 1227 aaKnown RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 GDAP1L1Q96MZ0 367 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 ANTXR1Q9H6X2 564 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 NLRC4Q9NPP4 1024 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 ALKQ9UM73 1620 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 GRID2IPA4D2P6 1211 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 K7ENM7 598 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 HSPD1P10809 573 aaKnown RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 ZAP70P43403 619 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 MMEL1Q495T6 779 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 JADE1Q6IE81 842 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 ARMCX5Q6P1M9 558 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 FBXO11Q86XK2 927 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 MYLK4Q86YV6 388 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 EGFL6Q8IUX8 553 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 TTC39CQ8N584 583 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 CXorf38Q8TB03 319 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 GIPC2Q8TF65 315 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 LARP4BQ92615 738 aaKnown RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 OATP04181 439 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 GFAPP14136 432 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 POLR2FP61218 127 aaKnown RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 PHEXP78562 749 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 PSMD6Q15008 389 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 G2E3Q7L622 706 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 APLFQ8IW19 511 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 NELFCDQ8IXH7 590 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 TRMT2AQ8IZ69 625 aaKnown RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 ZNF579Q8NAF0 562 aaKnown RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 TTC13Q8NBP0 860 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 PDLIM2Q96JY6 352 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 PARD6BQ9BYG5 372 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 NACA2Q9H009 215 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 LSG1Q9H089 658 aaKnown RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 VPS54Q9P1Q0 977 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 PALM3A6NDB9 673 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 HGSO14964 777 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 KCNA6P17658 529 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 CCNE1P24864 410 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 PDIA3P30101 505 aaKnown RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 MSH2P43246 934 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 TMED10P49755 219 aaKnown RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 GUCY2FP51841 1108 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 MKRN3Q13064 507 aaKnown RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 PROM2Q8N271 834 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 PNMA1Q8ND90 353 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 HELBQ8NG08 1087 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 PIP4K2CQ8TBX8 421 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 OSBPL1AQ9BXW6 950 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 FANCLQ9NW38 375 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 ZNF148Q9UQR1 794 aa9.63□□□□□ -0.87
SYNE1-209ENST00000367257 CPSF1Q10570 1443 aaKnown RBP9.63□□□□□ -0.87
SYNE1-209ENST00000367257 TNKSO95271 1327 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 MCF2LO15068 1137 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 MAPK13O15264 365 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 JAK2O60674 1132 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 TMEM191BP0C7N4 346 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 PDE6AP16499 860 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 HNRNPH1P31943 449 aaKnown RBP9.62□□□□□ -0.87
SYNE1-209ENST00000367257 GUCY2DQ02846 1103 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 ARHGAP44Q17R89 818 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 KLHL29Q96CT2 875 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 UPF3AQ9H1J1 476 aaKnown RBP9.62□□□□□ -0.87
SYNE1-209ENST00000367257 PPCSQ9HAB8 311 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 LEMD3Q9Y2U8 911 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 ANKRD26Q9UPS8 1709 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 STK36Q9NRP7 1315 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 HARSP12081 509 aaKnown RBP9.62□□□□□ -0.87
SYNE1-209ENST00000367257 GPT2Q8TD30 523 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 PHKBQ93100 1093 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 GRAMD1AQ96CP6 724 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 STK32BQ9NY57 414 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 PSD3Q9NYI0 1048 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 USP14P54578 494 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 FBXW10Q5XX13 1052 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 SUGP1Q8IWZ8 645 aaKnown RBP9.62□□□□□ -0.87
SYNE1-209ENST00000367257 RNF217Q8TC41 542 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 OLFM3Q96PB7 478 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 NACC1Q96RE7 527 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 FAM167BQ9BTA0 163 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 AMNQ9BXJ7 453 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 ZNF219Q9P2Y4 722 aaPredicted RBP9.62□□□□□ -0.87
SYNE1-209ENST00000367257 SAP30BPQ9UHR5 308 aaKnown RBP9.62□□□□□ -0.87
SYNE1-209ENST00000367257 ANAPC5Q9UJX4 755 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 KCNJ14Q9UNX9 436 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 PNMA6EA0A0J9YXQ4 647 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 CFAP73A6NFT4 308 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 H0YIN7 160 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms