RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 AGPAT5Q9NUQ2 364 aa25.09■■□□□ 1.61
LDB1-201ENST00000361198 NPHP3-ACAD11A0A0J9YXS1 232 aa25.09■■□□□ 1.61
LDB1-201ENST00000361198 CTAGE9A4FU28 777 aa25.09■■□□□ 1.61
LDB1-201ENST00000361198 TRIM21P19474 475 aaKnown RBP25.09■■□□□ 1.61
LDB1-201ENST00000361198 ARHGAP25P42331 645 aa25.09■■□□□ 1.61
LDB1-201ENST00000361198 CACNB1Q02641 598 aaPredicted RBP25.09■■□□□ 1.61
LDB1-201ENST00000361198 BRD3Q15059 726 aa25.09■■□□□ 1.61
LDB1-201ENST00000361198 FAM26FQ5R3K3 315 aa25.09■■□□□ 1.61
LDB1-201ENST00000361198 HAUS3Q68CZ6 603 aa25.09■■□□□ 1.61
LDB1-201ENST00000361198 NCAPH2Q6IBW4 605 aa25.09■■□□□ 1.61
LDB1-201ENST00000361198 FAM83AQ86UY5 434 aa25.09■■□□□ 1.61
LDB1-201ENST00000361198 GPBP1Q86WP2 473 aa25.09■■□□□ 1.61
LDB1-201ENST00000361198 WNT10BO00744 389 aa25.08■■□□□ 1.61
LDB1-201ENST00000361198 MSH4O15457 936 aa25.08■■□□□ 1.61
LDB1-201ENST00000361198 SLC26A4O43511 780 aa25.08■■□□□ 1.61
LDB1-201ENST00000361198 CYP11B2P19099 503 aa25.08■■□□□ 1.61
LDB1-201ENST00000361198 HOXA7P31268 230 aaPredicted RBP25.08■■□□□ 1.61
LDB1-201ENST00000361198 CCDC174Q6PII3 467 aa25.08■■□□□ 1.61
LDB1-201ENST00000361198 WDR59Q6PJI9 974 aa25.08■■□□□ 1.61
LDB1-201ENST00000361198 MYOCDQ8IZQ8 938 aa25.08■■□□□ 1.61
LDB1-201ENST00000361198 SLF1Q9BQI6 1058 aa25.08■■□□□ 1.61
LDB1-201ENST00000361198 FUT8Q9BYC5 575 aa25.08■■□□□ 1.61
LDB1-201ENST00000361198 FGFBP2Q9BYJ0 223 aa25.08■■□□□ 1.61
LDB1-201ENST00000361198 VCPKMTQ9H867 229 aa25.08■■□□□ 1.61
LDB1-201ENST00000361198 TBC1D7Q9P0N9 293 aa25.08■■□□□ 1.61
LDB1-201ENST00000361198 KIF13BQ9NQT8 1826 aa25.07■■□□□ 1.6
LDB1-201ENST00000361198 ABL1P00519 1130 aa25.07■■□□□ 1.6
LDB1-201ENST00000361198 CFBP00751 764 aa25.07■■□□□ 1.6
LDB1-201ENST00000361198 CAP2P40123 477 aa25.07■■□□□ 1.6
LDB1-201ENST00000361198 RAD51AP2Q09MP3 1159 aa25.07■■□□□ 1.6
LDB1-201ENST00000361198 LRRC55Q6ZSA7 311 aa25.07■■□□□ 1.6
LDB1-201ENST00000361198 FAM20AQ96MK3 541 aa25.07■■□□□ 1.6
LDB1-201ENST00000361198 ERGIC2Q96RQ1 377 aa25.07■■□□□ 1.6
LDB1-201ENST00000361198 GLIS2Q9BZE0 524 aaPredicted RBP25.07■■□□□ 1.6
LDB1-201ENST00000361198 PGAP2Q9UHJ9 254 aa25.07■■□□□ 1.6
LDB1-201ENST00000361198 SCAF8Q9UPN6 1271 aaKnown RBP25.07■■□□□ 1.6
LDB1-201ENST00000361198 CYP3A4P08684 503 aa25.07■■□□□ 1.6
LDB1-201ENST00000361198 SLC12A3P55017 1021 aa25.07■■□□□ 1.6
LDB1-201ENST00000361198 SLC35F6Q8N357 371 aa25.07■■□□□ 1.6
LDB1-201ENST00000361198 ZBED3Q96IU2 234 aaPredicted RBP25.07■■□□□ 1.6
LDB1-201ENST00000361198 NUP58Q9BVL2 599 aa25.07■■□□□ 1.6
LDB1-201ENST00000361198 SHTN1A0MZ66 631 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 SPATA31C1P0DKV0 1188 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 PSMC6P62333 389 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 KIF4BQ2VIQ3 1234 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 ARSHQ5FYA8 562 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 CCDC84Q86UT8 332 aaPredicted RBP25.06■■□□□ 1.6
LDB1-201ENST00000361198 RETREG2Q8NC44 543 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 HNRNPLLQ8WVV9 542 aaKnown RBP25.06■■□□□ 1.6
LDB1-201ENST00000361198 PCDHA2Q9Y5H9 948 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 EPN1Q9Y6I3 576 aaPredicted RBP25.06■■□□□ 1.6
LDB1-201ENST00000361198 RPA1P27694 616 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 ZNF76P36508 570 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 VWA3BQ502W6 1294 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 FKBP15Q5T1M5 1219 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 CCDC65Q8IXS2 484 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 CHURC1Q8WUH1 139 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 PCMTD1Q96MG8 357 aaPredicted RBP25.06■■□□□ 1.6
LDB1-201ENST00000361198 RANBP17Q9H2T7 1088 aaKnown RBP25.06■■□□□ 1.6
LDB1-201ENST00000361198 PIM2Q9P1W9 311 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 RAB21Q9UL25 225 aa25.06■■□□□ 1.6
LDB1-201ENST00000361198 UTRNP46939 3433 aa25.05■■□□□ 1.6
LDB1-201ENST00000361198 MEIS1O00470 390 aa25.05■■□□□ 1.6
LDB1-201ENST00000361198 NDUFA10O95299 355 aa25.05■■□□□ 1.6
LDB1-201ENST00000361198 FGFR1OPO95684 399 aaKnown RBP25.05■■□□□ 1.6
LDB1-201ENST00000361198 ZCWPW2Q504Y3 356 aa25.05■■□□□ 1.6
LDB1-201ENST00000361198 TAF3Q5VWG9 929 aa25.05■■□□□ 1.6
LDB1-201ENST00000361198 MSANTD4Q8NCY6 345 aa25.05■■□□□ 1.6
LDB1-201ENST00000361198 ERMNQ8TAM6 284 aa25.05■■□□□ 1.6
LDB1-201ENST00000361198 NDST4Q9H3R1 872 aa25.05■■□□□ 1.6
LDB1-201ENST00000361198 ANKZF1Q9H8Y5 726 aa25.05■■□□□ 1.6
LDB1-201ENST00000361198 POTEB2H3BUK9 544 aa25.05■■□□□ 1.6
LDB1-201ENST00000361198 CYP2C19P33261 490 aa25.05■■□□□ 1.6
LDB1-201ENST00000361198 TSR1Q2NL82 804 aaKnown RBP25.05■■□□□ 1.6
LDB1-201ENST00000361198 HERC4Q5GLZ8 1057 aaPredicted RBP25.05■■□□□ 1.6
LDB1-201ENST00000361198 SAMD1Q6SPF0 538 aaPredicted RBP25.05■■□□□ 1.6
LDB1-201ENST00000361198 NAPGQ99747 312 aaPredicted RBP25.05■■□□□ 1.6
LDB1-201ENST00000361198 TSG101Q99816 390 aa25.05■■□□□ 1.6
LDB1-201ENST00000361198 VAV3Q9UKW4 847 aa25.05■■□□□ 1.6
LDB1-201ENST00000361198 IGLV3-22A0A075B6J6 115 aa25.04■■□□□ 1.6
LDB1-201ENST00000361198 ERCC3P19447 782 aa25.04■■□□□ 1.6
LDB1-201ENST00000361198 TRAF1Q13077 416 aa25.04■■□□□ 1.6
LDB1-201ENST00000361198 MEA1Q16626 185 aa25.04■■□□□ 1.6
LDB1-201ENST00000361198 MAN2A1Q16706 1144 aa25.04■■□□□ 1.6
LDB1-201ENST00000361198 FOXR2Q6PJQ5 311 aa25.04■■□□□ 1.6
LDB1-201ENST00000361198 FBXO28Q9NVF7 368 aa25.04■■□□□ 1.6
LDB1-201ENST00000361198 REXO2Q9Y3B8 237 aaKnown RBP25.04■■□□□ 1.6
LDB1-201ENST00000361198 LONRF2Q1L5Z9 754 aa25.03■■□□□ 1.6
LDB1-201ENST00000361198 ZSWIM4Q9H7M6 989 aa25.03■■□□□ 1.6
LDB1-201ENST00000361198 MYOZ2Q9NPC6 264 aa25.03■■□□□ 1.6
LDB1-201ENST00000361198 PUF60Q9UHX1 559 aaKnown RBP25.03■■□□□ 1.6
LDB1-201ENST00000361198 ABCB11O95342 1321 aa25.03■■□□□ 1.6
LDB1-201ENST00000361198 MAP2K7O14733 419 aa25.03■■□□□ 1.6
LDB1-201ENST00000361198 ZBED6P86452 979 aa25.03■■□□□ 1.6
LDB1-201ENST00000361198 PABPC4Q13310 644 aaKnown RBP eCLIP25.03■■□□□ 1.67e-6■□□□□ 8
LDB1-201ENST00000361198 SMC1AQ14683 1233 aaKnown RBP25.03■■□□□ 1.6
LDB1-201ENST00000361198 WHAMMP3Q1A5X7 153 aa25.03■■□□□ 1.6
LDB1-201ENST00000361198 FIGNQ5HY92 759 aa25.03■■□□□ 1.6
LDB1-201ENST00000361198 CIAPIN1Q6FI81 312 aa25.03■■□□□ 1.6
LDB1-201ENST00000361198 DNM3Q9UQ16 869 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms