RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 KARSQ15046 597 aaKnown RBP14.71□□□□□ -0.06
SQSTM1-201ENST00000360718 POSTNQ15063 836 aa14.71□□□□□ -0.06
SQSTM1-201ENST00000360718 E2F4Q16254 413 aa14.71□□□□□ -0.06
SQSTM1-201ENST00000360718 SYT10Q6XYQ8 523 aa14.71□□□□□ -0.06
SQSTM1-201ENST00000360718 CABP7Q86V35 215 aa14.71□□□□□ -0.06
SQSTM1-201ENST00000360718 GRAMD1CQ8IYS0 662 aa14.71□□□□□ -0.06
SQSTM1-201ENST00000360718 TRIML1Q8N9V2 468 aa14.71□□□□□ -0.06
SQSTM1-201ENST00000360718 MLKLQ8NB16 471 aa14.71□□□□□ -0.06
SQSTM1-201ENST00000360718 FAM20AQ96MK3 541 aa14.71□□□□□ -0.06
SQSTM1-201ENST00000360718 MMTAG2Q9BU76 263 aaKnown RBP14.71□□□□□ -0.06
SQSTM1-201ENST00000360718 GPBP1L1Q9HC44 474 aaPredicted RBP14.71□□□□□ -0.06
SQSTM1-201ENST00000360718 A1CFQ9NQ94 594 aaKnown RBP14.71□□□□□ -0.06
SQSTM1-201ENST00000360718 PHLPP2Q6ZVD8 1323 aa14.7□□□□□ -0.06
SQSTM1-201ENST00000360718 CCL15-CCL14A0A0B4J2E2 113 aa14.7□□□□□ -0.06
SQSTM1-201ENST00000360718 BTBD19C9JJ37 291 aa14.7□□□□□ -0.06
SQSTM1-201ENST00000360718 ETF1P62495 437 aaKnown RBP14.7□□□□□ -0.06
SQSTM1-201ENST00000360718 CCL15Q16663 113 aa14.7□□□□□ -0.06
SQSTM1-201ENST00000360718 Q3C1V9 767 aa14.7□□□□□ -0.06
SQSTM1-201ENST00000360718 MAF1Q9H063 256 aa14.7□□□□□ -0.06
SQSTM1-201ENST00000360718 SPATC1LQ9H0A9 340 aa14.7□□□□□ -0.06
SQSTM1-201ENST00000360718 DISC1Q9NRI5 854 aa14.7□□□□□ -0.06
SQSTM1-201ENST00000360718 FANCLQ9NW38 375 aa14.7□□□□□ -0.06
SQSTM1-201ENST00000360718 KIAA1217Q5T5P2 1943 aa14.7□□□□□ -0.06
SQSTM1-201ENST00000360718 FRMPD4Q14CM0 1322 aa14.7□□□□□ -0.06
SQSTM1-201ENST00000360718 MSH4O15457 936 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 MDM2Q00987 491 aaPredicted RBP14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 CDK5RAP3Q96JB5 506 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 PTPN18Q99952 460 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 NUDT12Q9BQG2 462 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 SRRTQ9BXP5 876 aaKnown RBP14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 TMX1Q9H3N1 280 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 ACAD9Q9H845 621 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 CYP39A1Q9NYL5 469 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 GOLGA6L9A6NEM1 432 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 PRR29P0C7W0 189 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 CETPP11597 493 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 EIF2AK2P19525 551 aaKnown RBP14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 GTF2A2P52657 109 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 MRPS9P82933 396 aaKnown RBP14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 KRT79Q5XKE5 535 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 SAPCD2Q86UD0 394 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 RIOX2Q8IUF8 465 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 SMARCE1Q969G3 411 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 PLIN2Q99541 437 aa14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 MOV10L1Q9BXT6 1211 aaKnown RBP14.69□□□□□ -0.06
SQSTM1-201ENST00000360718 ZNFX1Q9P2E3 1918 aaKnown RBP14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 PDHXO00330 501 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 ITGB5P18084 799 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 CDK11BP21127 795 aaKnown RBP14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 GABPB1Q06547 395 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 NAALADL2Q58DX5 795 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 CT47A1Q5JQC4 288 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 NT5DC1Q5TFE4 455 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 CHST13Q8NET6 341 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 CUEDC2Q9H467 287 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.68□□□□□ -0.068e-7■□□□□ 10.8
SQSTM1-201ENST00000360718 ASTN1O14525 1302 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 ARHGAP6O43182 974 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 ZBTB48P10074 688 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 CASP1P29466 404 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 AFMP43652 599 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 SETQ01105 290 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 SPIRE1Q08AE8 756 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 PGM5Q15124 567 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 ELF2Q15723 593 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 KMT5BQ4FZB7 885 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 CEP55Q53EZ4 464 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 PDXDC2PQ6P474 469 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 RASAL3Q86YV0 1011 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 ENOX1Q8TC92 643 aaKnown RBP14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 PAGE5Q96GU1 130 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 RMDN3Q96TC7 470 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 MTRQ99707 1265 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 PXMP2Q9NR77 195 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 FBXO40Q9UH90 709 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 PNMA3Q9UL41 463 aa14.68□□□□□ -0.06
SQSTM1-201ENST00000360718 KIF20AO95235 890 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 ARP10275 920 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 ARHGEF16Q5VV41 709 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 KRT222Q8N1A0 295 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 STAMQ92783 540 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 PDCD2LQ9BRP1 358 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 MAGEF1Q9HAY2 307 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 MAN1B1Q9UKM7 699 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 STK24Q9Y6E0 443 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 MEIS1O00470 390 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 BMP6P22004 513 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 PCNX4Q63HM2 1172 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 SH3RF1Q7Z6J0 888 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 NCAPG2Q86XI2 1143 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 SNX29Q8TEQ0 813 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 WDR11Q9BZH6 1224 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 DNAI1Q9UI46 699 aa14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 V9GYY5 206 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-201ENST00000360718 LOXHD1Q8IVV2 1947 aa14.66□□□□□ -0.06
SQSTM1-201ENST00000360718 SLC26A4O43511 780 aa14.66□□□□□ -0.06
SQSTM1-201ENST00000360718 TPM1P09493 284 aa14.66□□□□□ -0.06
SQSTM1-201ENST00000360718 PLCG1P19174 1290 aa14.66□□□□□ -0.06
SQSTM1-201ENST00000360718 ERCC3P19447 782 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms