RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 GOPCQ9HD26 462 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 EMILIN3Q9NT22 766 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 ATF5Q9Y2D1 282 aaPredicted RBP10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 JRKLQ9Y4A0 524 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 CYP3A7-CYP3A51PA0A087WV96 503 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 POLR3GO15318 223 aaPredicted RBP10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 CYP3A7P24462 503 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 CACNB3P54284 484 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 HERVK_113P62684 666 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 HAS1Q92839 578 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 CEP72Q9P209 647 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 POTEB3A0JP26 581 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 POTECB2RU33 542 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 PPP1R11O60927 126 aaPredicted RBP10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 TCP1P17987 556 aaKnown RBP10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 HNRNPH3P31942 346 aaKnown RBP10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 POTEBQ6S5H4 581 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 TRAPPC11Q7Z392 1133 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 NELFCDQ8IXH7 590 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 HERC5Q9UII4 1024 aaKnown RBP10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 LRRC37AA6NMS7 1700 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 SSU72P8A0A1W2PR75 194 aa10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 E9PMD0 336 aa10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 GDF11O95390 407 aa10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 OAS2P29728 719 aaKnown RBP10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 EDRF1Q3B7T1 1238 aa10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 GRIPAP1Q4V328 841 aa10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 DACT2Q5SW24 774 aa10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 PAPD7Q5XG87 772 aaKnown RBP10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 CCDC155Q8N6L0 562 aa10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 NOX5Q96PH1 765 aa10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 CSRNP1Q96S65 589 aa10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 EPC1Q9H2F5 836 aa10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 KCNMB3Q9NPA1 279 aa10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 RAB21Q9UL25 225 aa10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 PCDHA13Q9Y5I0 950 aa10.27□□□□□ -0.76
GTF3C2-202ENST00000359541 EIF4A3P38919 411 aaKnown RBP10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 ADAM9Q13443 819 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 VPS36Q86VN1 386 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 CAPZA3Q96KX2 299 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 TBC1D7Q9P0N9 293 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 A0A0U1RQJ8 604 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 LRRC53A6NM62 1247 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 FAM196BA6NMK8 535 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 ENC1O14682 589 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 PPIP5K2O43314 1243 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 TBC1D8O95759 1140 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 NDUFB10O96000 172 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 TNNT3P45378 269 aaPredicted RBP10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 KLK7P49862 253 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 Q4G0T1 1027 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 MSL1Q68DK7 614 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 TATDN1Q6P1N9 297 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 CHURC1Q8WUH1 139 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 ATRIPQ8WXE1 791 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 SYN2Q92777 582 aaPredicted RBP10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 NUDT12Q9BQG2 462 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 LSM14BQ9BX40 385 aaKnown RBP10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 METTL14Q9HCE5 456 aaKnown RBP10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 SIK3Q9Y2K2 1263 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 REXO2Q9Y3B8 237 aaKnown RBP10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 MYH8P13535 1937 aa10.27□□□□□ -0.77
GTF3C2-202ENST00000359541 DDTLA6NHG4 134 aaPredicted RBP10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 GH2P01242 217 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 STAT2P52630 851 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 SF3B2Q13435 895 aaKnown RBP10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 IFI16Q16666 785 aaKnown RBP10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 PDXDC1Q6P996 788 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 LRRC55Q6ZSA7 311 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 DNAJC19Q96DA6 116 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 SPAG5Q96R06 1193 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 HYOU1Q9Y4L1 999 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 CDK5RAP2Q96SN8 1893 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 SERPING1P05155 500 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 EPB41P11171 864 aaKnown RBP10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 GAP43P17677 238 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 RPA1P27694 616 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 SREBF1P36956 1147 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 PLA2G4AP47712 749 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 CYP27A1Q02318 531 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 ZNF772Q68DY9 489 aaPredicted RBP10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 KCNK18Q7Z418 384 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 CCDC102AQ96A19 550 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 AKT1S1Q96B36 256 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 TRIM10Q9UDY6 481 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 FAM198AQ9UFP1 575 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 ARMCX3Q9UH62 379 aaPredicted RBP10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 TARSL2A2RTX5 802 aaKnown RBP10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 FAM13AO94988 1023 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 ATP1A1P05023 1023 aaKnown RBP10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 CYP11B2P19099 503 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 NR2F2P24468 414 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 AMPD2Q01433 879 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 ASIC2Q16515 512 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 CRACR2AQ9BSW2 395 aa10.26□□□□□ -0.77
GTF3C2-202ENST00000359541 EHHADHQ08426 723 aa10.25□□□□□ -0.77
GTF3C2-202ENST00000359541 RAPGEF1Q13905 1077 aa10.25□□□□□ -0.77
GTF3C2-202ENST00000359541 TNIP1Q15025 636 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms