RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 CLCN6P51797 869 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 KIF11P52732 1056 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 TMEM179Q6ZVK1 233 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 LRRC8CQ8TDW0 803 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 SLC26A4O43511 780 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 SMIM24O75264 130 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 HEXIM1O94992 359 aaKnown RBP13.28□□□□□ -0.28
DNMT1-202ENST00000359526 MYL7Q01449 175 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 IFT88Q13099 833 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 SEMA3FQ13275 785 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 TTC19Q6DKK2 380 aaPredicted RBP13.28□□□□□ -0.28
DNMT1-202ENST00000359526 VPS33BQ9H267 617 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 TNNC2P02585 160 aa13.27□□□□□ -0.28
DNMT1-202ENST00000359526 PDE1CQ14123 709 aaPredicted RBP13.27□□□□□ -0.28
DNMT1-202ENST00000359526 KRT81Q14533 505 aa13.27□□□□□ -0.28
DNMT1-202ENST00000359526 TXNRD1Q16881 649 aa13.27□□□□□ -0.28
DNMT1-202ENST00000359526 RASIP1Q5U651 963 aa13.27□□□□□ -0.28
DNMT1-202ENST00000359526 ARMCX5Q6P1M9 558 aa13.27□□□□□ -0.28
DNMT1-202ENST00000359526 CPXCR1Q8N123 301 aa13.27□□□□□ -0.28
DNMT1-202ENST00000359526 N4BP2L2Q92802 583 aaPredicted RBP13.27□□□□□ -0.28
DNMT1-202ENST00000359526 DAAM1Q9Y4D1 1078 aa13.27□□□□□ -0.28
DNMT1-202ENST00000359526 RPS12P25398 132 aaKnown RBP13.27□□□□□ -0.28
DNMT1-202ENST00000359526 NSFP46459 744 aaKnown RBP13.27□□□□□ -0.28
DNMT1-202ENST00000359526 E2F5Q15329 346 aa13.27□□□□□ -0.28
DNMT1-202ENST00000359526 TRIM42Q8IWZ5 723 aa13.27□□□□□ -0.28
DNMT1-202ENST00000359526 ATP6V0A1Q93050 837 aa13.27□□□□□ -0.28
DNMT1-202ENST00000359526 ACTR5Q9H9F9 607 aaPredicted RBP13.27□□□□□ -0.28
DNMT1-202ENST00000359526 VCX3AQ9NNX9 186 aa13.27□□□□□ -0.28
DNMT1-202ENST00000359526 IFNB1P01574 187 aa13.27□□□□□ -0.29
DNMT1-202ENST00000359526 HOXD10P28358 340 aa13.27□□□□□ -0.29
DNMT1-202ENST00000359526 ADORA1P30542 326 aa13.27□□□□□ -0.29
DNMT1-202ENST00000359526 BFSP1Q12934 665 aa13.27□□□□□ -0.29
DNMT1-202ENST00000359526 ZYXQ15942 572 aaKnown RBP13.27□□□□□ -0.29
DNMT1-202ENST00000359526 PLA2G4DQ86XP0 818 aa13.27□□□□□ -0.29
DNMT1-202ENST00000359526 FRMPD2Q68DX3 1309 aaPredicted RBP13.27□□□□□ -0.29
DNMT1-202ENST00000359526 CCND2P30279 289 aa13.27□□□□□ -0.29
DNMT1-202ENST00000359526 EIF3BP55884 814 aaKnown RBP13.27□□□□□ -0.29
DNMT1-202ENST00000359526 FBXO38Q6PIJ6 1188 aa13.27□□□□□ -0.29
DNMT1-202ENST00000359526 PFDN4Q9NQP4 134 aa13.27□□□□□ -0.29
DNMT1-202ENST00000359526 SERPINB13Q9UIV8 391 aa13.27□□□□□ -0.29
DNMT1-202ENST00000359526 POLR1AO95602 1720 aaPredicted RBP13.27□□□□□ -0.29
DNMT1-202ENST00000359526 NDUFA10O95299 355 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 ASNSP08243 561 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 PTK2Q05397 1052 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 DMP1Q13316 513 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-202ENST00000359526 TTLL11Q8NHH1 800 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 SERPING1P05155 500 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 USP17L8P0C7I0 530 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 TCP10Q12799 353 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 XKR9Q5GH70 373 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 EPSTI1Q96J88 318 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 ZNF512BQ96KM6 892 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-202ENST00000359526 TUBB6Q9BUF5 446 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 ZNF408Q9H9D4 720 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 EPB41L5Q9HCM4 733 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 KIAA1024Q9UPX6 916 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 PALM3A6NDB9 673 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-202ENST00000359526 NR2F2P24468 414 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 SLMAPQ14BN4 828 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 PSMD6Q15008 389 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 GLE1Q53GS7 698 aaKnown RBP13.26□□□□□ -0.29
DNMT1-202ENST00000359526 KCTD16Q68DU8 428 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 DGKHQ86XP1 1220 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 ANKRD35Q8N283 1001 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 CCHCR1Q8TD31 782 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 CSRNP1Q96S65 589 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 PUS3Q9BZE2 481 aaKnown RBP13.26□□□□□ -0.29
DNMT1-202ENST00000359526 ENC1O14682 589 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 AP3B2Q13367 1082 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 PROSER3Q2NL68 480 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 EMBQ6PCB8 327 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 GADL1Q6ZQY3 521 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 NT5C1BQ96P26 610 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 MLXIPQ9HAP2 919 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 PPM1KQ8N3J5 372 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 ZNF579Q8NAF0 562 aaKnown RBP13.26□□□□□ -0.29
DNMT1-202ENST00000359526 MAGOHBQ96A72 148 aaKnown RBP13.26□□□□□ -0.29
DNMT1-202ENST00000359526 AP5M1Q9H0R1 490 aa13.26□□□□□ -0.29
DNMT1-202ENST00000359526 NHEJ1Q9H9Q4 299 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-202ENST00000359526 GOLGA8QA0A0J9YX86 632 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 GOLGA8OA6NCC3 632 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 GOLGA8NF8WBI6 632 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 PNMA6AP0CW24 399 aaPredicted RBP13.25□□□□□ -0.29
DNMT1-202ENST00000359526 GARSP41250 739 aaKnown RBP13.25□□□□□ -0.29
DNMT1-202ENST00000359526 RESP18Q5W5W9 173 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 TEX2Q8IWB9 1127 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 PAGE5Q96GU1 130 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 MYO1FO00160 1098 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 SH3BP5O60239 455 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 GOLGA8HP0CJ92 632 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 LRRC63Q05C16 580 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 DIXDC1Q155Q3 683 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 ALX1Q15699 326 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 CDC37Q16543 378 aaPredicted RBP13.25□□□□□ -0.29
DNMT1-202ENST00000359526 SUSD4Q5VX71 490 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 PPP4R3CPQ6ZMV5 832 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 ARHGEF18Q6ZSZ5 1173 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 ADPGKQ9BRR6 497 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 SOWAHDA6NJG2 315 aa13.25□□□□□ -0.29
DNMT1-202ENST00000359526 PFDN1O60925 122 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms