RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 MYBP10242 640 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 SIK1P57059 783 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 IFT88Q13099 833 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 DIXDC1Q155Q3 683 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 UAP1Q16222 522 aaPredicted RBP11.98□□□□□ -0.49
RPE-202ENST00000359429 KIAA0753Q2KHM9 967 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 SPRED3Q2MJR0 410 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 ZCWPW2Q504Y3 356 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 MAATS1Q7Z4T9 603 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 USP38Q8NB14 1042 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.98□□□□□ -0.49
RPE-202ENST00000359429 NEUROG2Q9H2A3 272 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 CEP72Q9P209 647 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 TMEM59LQ9UK28 342 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 PHLPP1O60346 1717 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 H0YGN5 161 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 RASA1P20936 1047 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 HSPA9P38646 679 aaKnown RBP11.98□□□□□ -0.49
RPE-202ENST00000359429 SLC18A3Q16572 532 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 RNF187Q5TA31 235 aaPredicted RBP11.98□□□□□ -0.49
RPE-202ENST00000359429 ZNF444Q8N0Y2 327 aaPredicted RBP11.98□□□□□ -0.49
RPE-202ENST00000359429 CCDC24Q8N4L8 307 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 RAD54LQ92698 747 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 CABS1Q96KC9 395 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 EDEM3Q9BZQ6 932 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 UBA5Q9GZZ9 404 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 CENPHQ9H3R5 247 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 TMBIM4Q9HC24 238 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 CD248Q9HCU0 757 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 C6orf50Q9HD87 102 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 PPANQ9NQ55 473 aaKnown RBP11.98□□□□□ -0.49
RPE-202ENST00000359429 TBC1D7Q9P0N9 293 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 SAP30BPQ9UHR5 308 aaKnown RBP11.98□□□□□ -0.49
RPE-202ENST00000359429 ATP6V0A2Q9Y487 856 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 NFS1Q9Y697 457 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 CASZ1Q86V15 1759 aa11.98□□□□□ -0.49
RPE-202ENST00000359429 E7EVH7 732 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 TRAF5O00463 557 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 BACH1O14867 736 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 FGFR1OPO95684 399 aaKnown RBP11.97□□□□□ -0.49
RPE-202ENST00000359429 FLT3P36888 993 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 HSD17B3P37058 310 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 CALCRLQ16602 461 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 C6orf89Q6UWU4 347 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 DZIP1Q86YF9 867 aaKnown RBP11.97□□□□□ -0.49
RPE-202ENST00000359429 FAM133AQ8N9E0 248 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 WHAMMQ8TF30 809 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 TGFBRAP1Q8WUH2 860 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 SPZ1Q9BXG8 430 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 LRRC4CQ9HCJ2 640 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 STK17AQ9UEE5 414 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 COL4A3BPQ9Y5P4 624 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 ABCA3Q99758 1704 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 LAMB1P07942 1786 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 FAM107AO95990 144 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 GNA11P29992 359 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 RAPGEF1Q13905 1077 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 CCDC40Q4G0X9 1142 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 CCDC91Q7Z6B0 441 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 YTHDF3Q7Z739 585 aaKnown RBP11.97□□□□□ -0.49
RPE-202ENST00000359429 DNAJC19Q96DA6 116 aa11.97□□□□□ -0.49
RPE-202ENST00000359429 JPH2Q9BR39 696 aaPredicted RBP11.97□□□□□ -0.49
RPE-202ENST00000359429 HMGB1P1B2RPK0 211 aaPredicted RBP11.96□□□□□ -0.49
RPE-202ENST00000359429 KCNK3O14649 394 aa11.96□□□□□ -0.49
RPE-202ENST00000359429 TMOD1P28289 359 aa11.96□□□□□ -0.49
RPE-202ENST00000359429 COASYQ13057 564 aa11.96□□□□□ -0.49
RPE-202ENST00000359429 HLTFQ14527 1009 aaKnown RBP eCLIP11.96□□□□□ -0.49
RPE-202ENST00000359429 QPCTQ16769 361 aa11.96□□□□□ -0.49
RPE-202ENST00000359429 NELFCDQ8IXH7 590 aa11.96□□□□□ -0.49
RPE-202ENST00000359429 REXO1Q8N1G1 1221 aaKnown RBP11.96□□□□□ -0.49
RPE-202ENST00000359429 SNX29Q8TEQ0 813 aa11.96□□□□□ -0.49
RPE-202ENST00000359429 CDK5RAP3Q96JB5 506 aa11.96□□□□□ -0.49
RPE-202ENST00000359429 UIMC1Q96RL1 719 aa11.96□□□□□ -0.49
RPE-202ENST00000359429 TAF1DQ9H5J8 278 aaPredicted RBP11.96□□□□□ -0.49
RPE-202ENST00000359429 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.5
RPE-202ENST00000359429 RPS8P62241 208 aaKnown RBP11.96□□□□□ -0.5
RPE-202ENST00000359429 FKBP3Q00688 224 aaKnown RBP11.96□□□□□ -0.5
RPE-202ENST00000359429 ACTN3Q08043 901 aaPredicted RBP11.96□□□□□ -0.5
RPE-202ENST00000359429 SPATS2Q86XZ4 545 aaKnown RBP11.96□□□□□ -0.5
RPE-202ENST00000359429 MAPKAPK5Q8IW41 473 aa11.96□□□□□ -0.5
RPE-202ENST00000359429 CCDC13Q8IYE1 715 aa11.96□□□□□ -0.5
RPE-202ENST00000359429 MYOCDQ8IZQ8 938 aa11.96□□□□□ -0.5
RPE-202ENST00000359429 C1orf131Q8NDD1 294 aaKnown RBP11.96□□□□□ -0.5
RPE-202ENST00000359429 SYN2Q92777 582 aaPredicted RBP11.96□□□□□ -0.5
RPE-202ENST00000359429 COA7Q96BR5 231 aa11.96□□□□□ -0.5
RPE-202ENST00000359429 CYFIP2Q96F07 1278 aa11.96□□□□□ -0.5
RPE-202ENST00000359429 AP1M1Q9BXS5 423 aa11.96□□□□□ -0.5
RPE-202ENST00000359429 ISCUQ9H1K1 167 aa11.96□□□□□ -0.5
RPE-202ENST00000359429 VCPKMTQ9H867 229 aa11.96□□□□□ -0.5
RPE-202ENST00000359429 RIC8AQ9NPQ8 531 aa11.96□□□□□ -0.5
RPE-202ENST00000359429 PLCB1Q9NQ66 1216 aa11.96□□□□□ -0.5
RPE-202ENST00000359429 CNOT8Q9UFF9 292 aaKnown RBP11.96□□□□□ -0.5
RPE-202ENST00000359429 SLC12A6Q9UHW9 1150 aa11.96□□□□□ -0.5
RPE-202ENST00000359429 MYH1P12882 1939 aa11.96□□□□□ -0.5
RPE-202ENST00000359429 DCDC2CA8MYV0 355 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 ACTN1P12814 892 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 ZNF844Q08AG5 666 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 KLHL30Q0D2K2 578 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 SOGA3Q5TF21 947 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 TSG101Q99816 390 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms