RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 PDE4DQ08499 809 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 PLS1Q14651 629 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 KRT79Q5XKE5 535 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 ARMCX5Q6P1M9 558 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 MNS1Q8NEH6 495 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 ETNPPLQ8TBG4 499 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 MRFAP1L1Q96HT8 127 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 CLMNQ96JQ2 1002 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 TRIM9Q9C026 710 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 PICK1Q9NRD5 415 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 RGL1Q9NZL6 768 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 FEM1BQ9UK73 627 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 PCDHB8Q9UN66 801 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 COL11A1P12107 1806 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-202ENST00000359366 USP27XA6NNY8 438 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 CCDC172P0C7W6 258 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 ARP10275 920 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 ZNF18P17022 549 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 EIF2AK2P19525 551 aaKnown RBP5.68□□□□□ -1.5
ATXN3-202ENST00000359366 SREBF1P36956 1147 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 GABPB1Q06547 395 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-202ENST00000359366 PABPC4Q13310 644 aaKnown RBP eCLIP5.68□□□□□ -1.5
ATXN3-202ENST00000359366 TPD52L1Q16890 204 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-202ENST00000359366 EAPPQ56P03 285 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-202ENST00000359366 NSMFQ6X4W1 530 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 ZNF467Q7Z7K2 595 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-202ENST00000359366 GPIHBP1Q8IV16 184 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 ELOA2Q8IYF1 753 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-202ENST00000359366 SCYL3Q8IZE3 742 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 PIGOQ8TEQ8 1089 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 CPLX3Q8WVH0 158 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 CRYGNQ8WXF5 182 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 LARP4BQ92615 738 aaKnown RBP5.68□□□□□ -1.5
ATXN3-202ENST00000359366 AK8Q96MA6 479 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 NCAPGQ9BPX3 1015 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 SH2D3AQ9BRG2 576 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 KIAA1683Q9H0B3 1180 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 ZHX3Q9H4I2 956 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 SH2D4AQ9H788 454 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 KCNMB3Q9NPA1 279 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 TRMT1Q9NXH9 659 aaKnown RBP5.68□□□□□ -1.5
ATXN3-202ENST00000359366 TAB2Q9NYJ8 693 aa5.68□□□□□ -1.5
ATXN3-202ENST00000359366 DICER1Q9UPY3 1922 aaKnown RBP5.68□□□□□ -1.5
ATXN3-202ENST00000359366 GOLGA6L6A8MZA4 724 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 USP2O75604 605 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 PBX2P40425 430 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 ADKP55263 362 aaKnown RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 BACE1P56817 501 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 SPIRE1Q08AE8 756 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 PAK1Q13153 545 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 VGLL4Q14135 290 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 CTTNQ14247 550 aaKnown RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 ZNF658Q5TYW1 1059 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 CEP135Q66GS9 1140 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 DCAF15Q66K64 600 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 SV2BQ7L1I2 683 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 CATSPER3Q86XQ3 398 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 APOBEC3FQ8IUX4 373 aaKnown RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 LRRC8AQ8IWT6 810 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 FAM177A1Q8N128 213 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 TRIML1Q8N9V2 468 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 PRPF38AQ8NAV1 312 aaKnown RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 KIAA0895Q8NCT3 520 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 ZNF280CQ8ND82 737 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 ENOX1Q8TC92 643 aaKnown RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 CLEC4DQ8WXI8 215 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 RAD54LQ92698 747 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 DDX12PQ92771 950 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 KLRG1Q96E93 195 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 CCDC34Q96HJ3 373 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 WDR11Q9BZH6 1224 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 VPS16Q9H269 839 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 R3HDMLQ9H3Y0 253 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 EXOC1Q9NV70 894 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 DOCK1Q14185 1865 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 IGLV3-22A0A075B6J6 115 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 SFI1A8K8P3 1242 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 PES1O00541 588 aaKnown RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 WDR46O15213 610 aaKnown RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 NRDCO43847 1150 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 ICAM1P05362 532 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 MYCLP12524 364 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 SKILP12757 684 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 CDC25BP30305 580 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 USP11P51784 963 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 AP3B2Q13367 1082 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 TTLL12Q14166 644 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 NOLC1Q14978 699 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 GPR162Q16538 588 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 TMEM119Q4V9L6 283 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 TREML2Q5T2D2 321 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 SPATA1Q5VX52 437 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 KRT26Q7Z3Y9 468 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 FAM160B2Q86V87 743 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 KIAA1524Q8TCG1 905 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 TAAR1Q96RJ0 339 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 IKZF4Q9H2S9 585 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 ELP3Q9H9T3 547 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms