RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 BSDC1Q9NW68 430 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-203ENST00000358528 ZNF219Q9P2Y4 722 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-203ENST00000358528 ARMCX3Q9UH62 379 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-203ENST00000358528 AMACRQ9UHK6 382 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 A0A087X0T9 212 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 LAD1O00515 517 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 DAPK3O43293 454 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 CYTH3O43739 400 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 PPP1R37O75864 691 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 GFPT2O94808 682 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 FAM228BP0C875 321 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 CDK8P49336 464 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 ADCY1Q08828 1119 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 COASYQ13057 564 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 PPP1R7Q15435 360 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 RUFY4Q6ZNE9 571 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 PAXIP1Q6ZW49 1069 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-203ENST00000358528 CACNA2D3Q8IZS8 1091 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 AENQ8WTP8 325 aaKnown RBP7.2□□□□□ -1.26
CSDE1-203ENST00000358528 ZNF473Q8WTR7 871 aaKnown RBP7.2□□□□□ -1.26
CSDE1-203ENST00000358528 CASKIN2Q8WXE0 1202 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 NUDT12Q9BQG2 462 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 IL17RBQ9NRM6 502 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 PKD2L1Q9P0L9 805 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 MAD2L2Q9UI95 211 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 GOLGA6L10A0A0M3HER8 536 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 POTEB3A0JP26 581 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 POTECB2RU33 542 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 NTSR2O95665 410 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 CLTAP09496 248 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 COPB2P35606 906 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 STAT3P40763 770 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 MRPL12P52815 198 aaKnown RBP7.2□□□□□ -1.26
CSDE1-203ENST00000358528 MAGOHP61326 146 aaKnown RBP7.2□□□□□ -1.26
CSDE1-203ENST00000358528 ZNF211Q13398 564 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-203ENST00000358528 NAA25Q14CX7 972 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 EXOC3L4Q17RC7 722 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 TBC1D10BQ4KMP7 808 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-203ENST00000358528 PRR16Q569H4 304 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 ALKBH5Q6P6C2 394 aaKnown RBP7.2□□□□□ -1.26
CSDE1-203ENST00000358528 POTEBQ6S5H4 581 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 ZNF804AQ7Z570 1209 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 WDR66Q8TBY9 1149 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 MAGOHBQ96A72 148 aaKnown RBP7.2□□□□□ -1.26
CSDE1-203ENST00000358528 ERGIC2Q96RQ1 377 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 TLR10Q9BXR5 811 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 KCNK9Q9NPC2 374 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 EMILIN3Q9NT22 766 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 SALL4Q9UJQ4 1053 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 MYH2Q9UKX2 1941 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 MEFVO15553 781 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-203ENST00000358528 SLC37A4O43826 429 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 FLOT1O75955 427 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 CAMTA2O94983 1202 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 H2AFZP0C0S5 128 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 XRCC5P13010 732 aaKnown RBP7.2□□□□□ -1.26
CSDE1-203ENST00000358528 EZRP15311 586 aaKnown RBP7.2□□□□□ -1.26
CSDE1-203ENST00000358528 GUCY2CP25092 1073 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 PLTPP55058 493 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 ITPK1Q13572 414 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 MEA1Q16626 185 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 MIIPQ5JXC2 388 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 MFSD14BQ5SR56 506 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 C12orf60Q5U649 245 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 GALNT17Q6IS24 598 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 RCSD1Q6JBY9 416 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 H2AFVQ71UI9 128 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 TCP11Q8WWU5 503 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 ATP6V1G3Q96LB4 118 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 CELF4Q9BZC1 486 aaKnown RBP7.2□□□□□ -1.26
CSDE1-203ENST00000358528 MAGEF1Q9HAY2 307 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 FBXL5Q9UKA1 691 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 CD2APQ9Y5K6 639 aa7.2□□□□□ -1.26
CSDE1-203ENST00000358528 GSTTP1A0A1W2PQM5 241 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 USP17L15C9J2P7 530 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 USP17L13C9JLJ4 530 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 USP17L11C9JVI0 530 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 USP17L18D6R9N7 530 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 USP17L22D6RA61 530 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 USP17L17D6RBQ6 530 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 USP17L19D6RCP7 530 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 USP17L20D6RJB6 530 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 CTNND1O60716 968 aaKnown RBP7.19□□□□□ -1.26
CSDE1-203ENST00000358528 LRRC63Q05C16 580 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 USP17L24Q0WX57 530 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 TCP10Q12799 353 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 KCNH2Q12809 1159 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 KLHDC7AQ5VTJ3 777 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 USP17L6PQ6QN14 398 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 LMBR1Q8WVP7 490 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 C7orf25Q9BPX7 421 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 TACO1Q9BSH4 297 aaKnown RBP7.19□□□□□ -1.26
CSDE1-203ENST00000358528 PSTPIP2Q9H939 334 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 SH3GLB2Q9NR46 395 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 GGT7Q9UJ14 662 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 MST1RQ04912 1400 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 PHF20L1A8MW92 1017 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 PGRMC1O00264 195 aaKnown RBP7.19□□□□□ -1.26
CSDE1-203ENST00000358528 LRRN2O75325 713 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 SLC9A1P19634 815 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms