RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 LAD1O00515 517 aa17.23■□□□□ 0.35
TPM1-206ENST00000358278 GGPS1O95749 300 aa17.23■□□□□ 0.35
TPM1-206ENST00000358278 RARBP10826 455 aa17.23■□□□□ 0.35
TPM1-206ENST00000358278 KRT85P78386 507 aa17.23■□□□□ 0.35
TPM1-206ENST00000358278 ITGB3BPQ13352 177 aaPredicted RBP17.23■□□□□ 0.35
TPM1-206ENST00000358278 TMEM63BQ5T3F8 832 aa17.23■□□□□ 0.35
TPM1-206ENST00000358278 TLK2Q86UE8 772 aa17.23■□□□□ 0.35
TPM1-206ENST00000358278 DHX37Q8IY37 1157 aaKnown RBP17.23■□□□□ 0.35
TPM1-206ENST00000358278 COPS5Q92905 334 aa17.23■□□□□ 0.35
TPM1-206ENST00000358278 SLC5A5Q92911 643 aa17.23■□□□□ 0.35
TPM1-206ENST00000358278 GJA10Q969M2 543 aa17.23■□□□□ 0.35
TPM1-206ENST00000358278 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.23■□□□□ 0.35
TPM1-206ENST00000358278 UNC93B1Q9H1C4 597 aa17.23■□□□□ 0.35
TPM1-206ENST00000358278 MLXIPQ9HAP2 919 aa17.23■□□□□ 0.35
TPM1-206ENST00000358278 TBC1D22BQ9NU19 505 aa17.23■□□□□ 0.35
TPM1-206ENST00000358278 POLR3EQ9NVU0 708 aa17.23■□□□□ 0.35
TPM1-206ENST00000358278 CFAP45Q9UL16 551 aa17.23■□□□□ 0.35
TPM1-206ENST00000358278 MSCO60682 206 aa17.22■□□□□ 0.35
TPM1-206ENST00000358278 GH1P01241 217 aa17.22■□□□□ 0.35
TPM1-206ENST00000358278 CCL5P13501 91 aa17.22■□□□□ 0.35
TPM1-206ENST00000358278 ATP2C1P98194 919 aaPredicted RBP17.22■□□□□ 0.35
TPM1-206ENST00000358278 STK38Q15208 465 aa17.22■□□□□ 0.35
TPM1-206ENST00000358278 MTFR1Q15390 333 aa17.22■□□□□ 0.35
TPM1-206ENST00000358278 CYFIP1Q7L576 1253 aa17.22■□□□□ 0.35
TPM1-206ENST00000358278 HAS1Q92839 578 aa17.22■□□□□ 0.35
TPM1-206ENST00000358278 ARMC5Q96C12 935 aa17.22■□□□□ 0.35
TPM1-206ENST00000358278 ZNF333Q96JL9 665 aa17.22■□□□□ 0.35
TPM1-206ENST00000358278 TEKT3Q9BXF9 490 aa17.22■□□□□ 0.35
TPM1-206ENST00000358278 JPH1Q9HDC5 661 aaPredicted RBP17.22■□□□□ 0.35
TPM1-206ENST00000358278 DDX20Q9UHI6 824 aaKnown RBP17.22■□□□□ 0.35
TPM1-206ENST00000358278 NFASCO94856 1347 aa17.22■□□□□ 0.35
TPM1-206ENST00000358278 DUSP11O75319 330 aaKnown RBP17.21■□□□□ 0.35
TPM1-206ENST00000358278 PTGS1P23219 599 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 TXKP42681 527 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 SP4Q02446 784 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 CELF3Q5SZQ8 465 aaKnown RBP17.21■□□□□ 0.35
TPM1-206ENST00000358278 METTL7BQ6UX53 244 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 OR6J1Q8NGC5 347 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 KAT6AQ92794 2004 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 MTMR9Q96QG7 549 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 RIT2Q99578 217 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 RNF208Q9H0X6 261 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 GNEQ9Y223 722 aaKnown RBP17.21■□□□□ 0.35
TPM1-206ENST00000358278 FARP2O94887 1054 aaPredicted RBP17.21■□□□□ 0.35
TPM1-206ENST00000358278 NASPP49321 788 aaPredicted RBP17.21■□□□□ 0.35
TPM1-206ENST00000358278 ARHGAP1Q07960 439 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 TMEM266Q2M3C6 531 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 C4orf32Q8N8J7 132 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 CHAMP1Q96JM3 812 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 AP5M1Q9H0R1 490 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 SLC9A2Q9UBY0 812 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 PCDHA12Q9UN75 941 aa17.21■□□□□ 0.35
TPM1-206ENST00000358278 NOP56O00567 594 aaKnown RBP17.2■□□□□ 0.34
TPM1-206ENST00000358278 DYNC1LI2O43237 492 aaPredicted RBP17.2■□□□□ 0.34
TPM1-206ENST00000358278 PSMD10O75832 226 aa17.2■□□□□ 0.34
TPM1-206ENST00000358278 YEATS4O95619 227 aa17.2■□□□□ 0.34
TPM1-206ENST00000358278 PRPHP41219 470 aa17.2■□□□□ 0.34
TPM1-206ENST00000358278 LAMC2Q13753 1193 aa17.2■□□□□ 0.34
TPM1-206ENST00000358278 TNPO1Q92973 898 aaKnown RBP17.2■□□□□ 0.34
TPM1-206ENST00000358278 SPATA33Q96N06 139 aa17.2■□□□□ 0.34
TPM1-206ENST00000358278 BCAS3Q9H6U6 928 aa17.2■□□□□ 0.34
TPM1-206ENST00000358278 TTC12Q9H892 705 aaPredicted RBP17.2■□□□□ 0.34
TPM1-206ENST00000358278 SPC25Q9HBM1 224 aa17.2■□□□□ 0.34
TPM1-206ENST00000358278 XPNPEP3Q9NQH7 507 aa17.2■□□□□ 0.34
TPM1-206ENST00000358278 SYNRGQ9UMZ2 1314 aa17.2■□□□□ 0.34
TPM1-206ENST00000358278 DHX15O43143 795 aaKnown RBP17.19■□□□□ 0.34
TPM1-206ENST00000358278 CHMP2AO43633 222 aa17.19■□□□□ 0.34
TPM1-206ENST00000358278 KRT76Q01546 638 aa17.19■□□□□ 0.34
TPM1-206ENST00000358278 SLC39A14Q15043 492 aa17.19■□□□□ 0.34
TPM1-206ENST00000358278 PTPAQ15257 358 aa17.19■□□□□ 0.34
TPM1-206ENST00000358278 ARL6IP4Q66PJ3 421 aaKnown RBP17.19■□□□□ 0.34
TPM1-206ENST00000358278 DTHD1Q6ZMT9 781 aa17.19■□□□□ 0.34
TPM1-206ENST00000358278 LINC00301Q8NCQ3 95 aa17.19■□□□□ 0.34
TPM1-206ENST00000358278 EMID1Q96A84 441 aaPredicted RBP17.19■□□□□ 0.34
TPM1-206ENST00000358278 PAK6Q9NQU5 681 aaPredicted RBP17.19■□□□□ 0.34
TPM1-206ENST00000358278 Q9Y3F1 56 aa17.19■□□□□ 0.34
TPM1-206ENST00000358278 PGK1P00558 417 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 MYCNP04198 464 aaPredicted RBP17.18■□□□□ 0.34
TPM1-206ENST00000358278 C6orf222P0C671 652 aaPredicted RBP17.18■□□□□ 0.34
TPM1-206ENST00000358278 MARCKSP29966 332 aaPredicted RBP17.18■□□□□ 0.34
TPM1-206ENST00000358278 BRDTQ58F21 947 aaPredicted RBP17.18■□□□□ 0.34
TPM1-206ENST00000358278 SPATA32Q96LK8 384 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 DEFB118Q96PH6 123 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 RAB34Q9BZG1 259 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 SAMM50Q9Y512 469 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 LOXHD1Q8IVV2 1947 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 VWA3AA6NCI4 1184 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 SPTLC2O15270 562 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 TECP42680 631 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 CPT1AP50416 773 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 HSDL1Q3SXM5 330 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 ZNF746Q6NUN9 644 aaPredicted RBP17.18■□□□□ 0.34
TPM1-206ENST00000358278 PPTC7Q8NI37 304 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 KCNG4Q8TDN1 519 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 AFG1LQ8WV93 481 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 SCAND2PQ9GZW5 306 aaPredicted RBP17.18■□□□□ 0.34
TPM1-206ENST00000358278 UNC45AQ9H3U1 944 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 VAV3Q9UKW4 847 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 ELP1O95163 1332 aa17.18■□□□□ 0.34
TPM1-206ENST00000358278 POTEMA6NI47 508 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms