RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 TEX9Q8N6V9 391 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 RUBCNQ92622 972 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 AK8Q96MA6 479 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 NT5C1BQ96P26 610 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 TEX12Q9BXU0 123 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 LRFN2Q9ULH4 789 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 ENC1O14682 589 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 OSBPP22059 807 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 IFNA8P32881 189 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 FBXO11Q86XK2 927 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 KIAA2013Q8IYS2 634 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 GAP43P17677 238 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 PPARAQ07869 468 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 HP1BP3Q5SSJ5 553 aaPredicted RBP13.85□□□□□ -0.19
SMC4-202ENST00000357388 NAA35Q5VZE5 725 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 KAZNQ674X7 775 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 TTBK2Q6IQ55 1244 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 METTL23Q86XA0 190 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 DNAJC10Q8IXB1 793 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 NLGN1Q8N2Q7 840 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 GRAMD1AQ96CP6 724 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 GIMAP4Q9NUV9 329 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 TRIM33Q9UPN9 1127 aa13.85□□□□□ -0.19
SMC4-202ENST00000357388 DMP1Q13316 513 aaPredicted RBP13.84□□□□□ -0.19
SMC4-202ENST00000357388 DPP9Q86TI2 863 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 CACTINQ8WUQ7 758 aaKnown RBP13.84□□□□□ -0.19
SMC4-202ENST00000357388 NUDCD1Q96RS6 583 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 ZBTB18Q99592 522 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 THAP9Q9H5L6 903 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 SMYD2Q9NRG4 433 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 F8W8V4 182 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 K7ENM7 598 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 AFPP02771 609 aaKnown RBP13.84□□□□□ -0.19
SMC4-202ENST00000357388 SERPING1P05155 500 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 PCP11498 1178 aaKnown RBP13.84□□□□□ -0.19
SMC4-202ENST00000357388 CA4P22748 312 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 CERKLQ49MI3 558 aaPredicted RBP13.84□□□□□ -0.19
SMC4-202ENST00000357388 C4orf50Q6ZRC1 276 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 GPIHBP1Q8IV16 184 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 FAM178BQ8IXR5 827 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 ELAC2Q9BQ52 826 aaKnown RBP13.84□□□□□ -0.19
SMC4-202ENST00000357388 POLR3EQ9NVU0 708 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 ZFP69BQ9UJL9 534 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 WDR17Q8IZU2 1322 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 ESRRBO95718 433 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 MKRN3Q13064 507 aaKnown RBP13.84□□□□□ -0.19
SMC4-202ENST00000357388 KLC3Q6P597 504 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 ICA1LQ8NDH6 482 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 OTUD7AQ8TE49 926 aaPredicted RBP13.84□□□□□ -0.19
SMC4-202ENST00000357388 MAML1Q92585 1016 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.84□□□□□ -0.192e-13■■■■■ 56.3
SMC4-202ENST00000357388 MTBPQ96DY7 904 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 POLE3Q9NRF9 147 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 KDRP35968 1356 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 GTPBP10A4D1E9 387 aaKnown RBP13.84□□□□□ -0.19
SMC4-202ENST00000357388 A1BGP04217 495 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 PPM1KQ8N3J5 372 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 TTC25Q96NG3 672 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 APOBEC2Q9Y235 224 aaKnown RBP13.84□□□□□ -0.19
SMC4-202ENST00000357388 ABCC12Q96J65 1359 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 KRT37O76014 449 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 TAC1P20366 129 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 THOC5Q13769 683 aaKnown RBP13.84□□□□□ -0.19
SMC4-202ENST00000357388 CYP4F22Q6NT55 531 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 ZNF594Q96JF6 807 aaPredicted RBP13.84□□□□□ -0.19
SMC4-202ENST00000357388 RWDD2AQ9UIY3 292 aa13.84□□□□□ -0.19
SMC4-202ENST00000357388 CFLARO15519 480 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 PLS3P13797 630 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 TRPC1P48995 793 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 POLGP54098 1239 aaPredicted RBP13.83□□□□□ -0.2
SMC4-202ENST00000357388 MAP3K10Q02779 954 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 SLC39A14Q15043 492 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 ARMCX5Q6P1M9 558 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 GDAP1Q8TB36 358 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 DHX38Q92620 1227 aaKnown RBP13.83□□□□□ -0.2
SMC4-202ENST00000357388 P2RX5Q93086 422 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 CYTH2Q99418 400 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.83□□□□□ -0.2
SMC4-202ENST00000357388 GMNCA6NCL1 334 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 HAUS5O94927 633 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 USP14P54578 494 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 MRPS15P82914 257 aaKnown RBP13.83□□□□□ -0.2
SMC4-202ENST00000357388 ZNF658Q5TYW1 1059 aaPredicted RBP13.83□□□□□ -0.2
SMC4-202ENST00000357388 MCUQ8NE86 351 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 ZNF653Q96CK0 615 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 OSBPL9Q96SU4 736 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 SUGCTQ9HAC7 445 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 SUN2Q9UH99 717 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 SLC12A6Q9UHW9 1150 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 PCDHA12Q9UN75 941 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 PLAAQ9Y263 795 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 HMGB3O15347 200 aaKnown RBP13.83□□□□□ -0.2
SMC4-202ENST00000357388 CTIFO43310 598 aaKnown RBP13.83□□□□□ -0.2
SMC4-202ENST00000357388 ICA1Q05084 483 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 CEP55Q53EZ4 464 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 TMC4Q7Z404 712 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 GAS2L3Q86XJ1 694 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 RDH13Q8NBN7 331 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 MTRQ99707 1265 aa13.83□□□□□ -0.2
SMC4-202ENST00000357388 OSBPL1AQ9BXW6 950 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms