RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 SERPINB13Q9UIV8 391 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 AMFRQ9UKV5 643 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 LMO7Q8WWI1 1683 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 POTEFA5A3E0 1075 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 RCCD1A6NED2 376 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 SPOPO43791 374 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 LRRN2O75325 713 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 TTLL1O95922 423 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 POTEIP0CG38 1075 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 PRPHP41219 470 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 CACNB3P54284 484 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 GUCY1A3Q02108 690 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 SBK1Q52WX2 424 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 MSL1Q68DK7 614 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 ALKBH5Q6P6C2 394 aaKnown RBP7.49□□□□□ -1.21
RTN4-203ENST00000357376 PDXDC1Q6P996 788 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 POTEGQ6S5H5 508 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 POTEEQ6S8J3 1075 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 IL17RBQ9NRM6 502 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 PVALEFA0A1B0GWK0 134 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 ADAMTS3O15072 1205 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 PBX1P40424 430 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 CARSP49589 748 aaKnown RBP7.48□□□□□ -1.21
RTN4-203ENST00000357376 IRX3P78415 501 aaPredicted RBP7.48□□□□□ -1.21
RTN4-203ENST00000357376 FUT2Q10981 343 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 TNIP1Q15025 636 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 PPP1R7Q15435 360 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 TTBK2Q6IQ55 1244 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 FAM196AQ6ZSG2 479 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 TBC1D22AQ8WUA7 517 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 DUSP9Q99956 384 aaKnown RBP7.48□□□□□ -1.21
RTN4-203ENST00000357376 C7orf25Q9BPX7 421 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 DDX47Q9H0S4 455 aaKnown RBP7.48□□□□□ -1.21
RTN4-203ENST00000357376 VIPAS39Q9H9C1 493 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 GCNT4Q9P109 453 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 ARHGAP20Q9P2F6 1191 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 PLAAQ9Y263 795 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 ATP8A1Q9Y2Q0 1164 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.48□□□□□ -1.21
RTN4-203ENST00000357376 REXO2Q9Y3B8 237 aaKnown RBP7.48□□□□□ -1.21
RTN4-203ENST00000357376 LRRC10BA6NIK2 292 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 USP17L10C9JJH3 530 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 PDE2AO00408 941 aaPredicted RBP7.48□□□□□ -1.21
RTN4-203ENST00000357376 BACH1O14867 736 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 SLC37A4O43826 429 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 AFPP02771 609 aaKnown RBP7.48□□□□□ -1.21
RTN4-203ENST00000357376 ACTN1P12814 892 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 KCNH2Q12809 1159 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 PAPD7Q5XG87 772 aaKnown RBP7.48□□□□□ -1.21
RTN4-203ENST00000357376 ALS2CLQ60I27 953 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 DNAAF5Q86Y56 855 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 NAP1L4Q99733 375 aaKnown RBP7.48□□□□□ -1.21
RTN4-203ENST00000357376 SEMA6BQ9H3T3 888 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 CD209Q9NNX6 404 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 KCNK9Q9NPC2 374 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 TMEM51Q9NW97 253 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 CEP72Q9P209 647 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 ATRNO75882 1429 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 A6NNZ2 444 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 PGRMC1O00264 195 aaKnown RBP7.48□□□□□ -1.21
RTN4-203ENST00000357376 MYBL2P10244 700 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 AKR1B1P15121 316 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 APBA1Q02410 837 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 GRAPQ13588 217 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 KCTD19Q17RG1 926 aaPredicted RBP7.48□□□□□ -1.21
RTN4-203ENST00000357376 TUBB8Q3ZCM7 444 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 NAALADL2Q58DX5 795 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 SLFN13Q68D06 897 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 CCDC174Q6PII3 467 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 WDR59Q6PJI9 974 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 LINC00116Q8NCU8 138 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 GRAPLQ8TC17 118 aaPredicted RBP7.48□□□□□ -1.21
RTN4-203ENST00000357376 MGARPQ8TDB4 240 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 EHD4Q9H223 541 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 BHMT2Q9H2M3 363 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 PLAGL2Q9UPG8 496 aa7.48□□□□□ -1.21
RTN4-203ENST00000357376 CAMTA1Q9Y6Y1 1673 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 ZSCAN5CA6NGD5 496 aaPredicted RBP7.47□□□□□ -1.21
RTN4-203ENST00000357376 CYTH3O43739 400 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 ATP2B4P23634 1241 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 HOXA13P31271 388 aaPredicted RBP7.47□□□□□ -1.21
RTN4-203ENST00000357376 IRAK1P51617 712 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 DHX9Q08211 1270 aaKnown RBP7.47□□□□□ -1.21
RTN4-203ENST00000357376 SEPT7Q16181 437 aaKnown RBP7.47□□□□□ -1.21
RTN4-203ENST00000357376 IRF2BP1Q8IU81 584 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 KSR1Q8IVT5 923 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 SYCE1Q8N0S2 351 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 ANKS4BQ8N8V4 417 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 NEDD1Q8NHV4 660 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 ERGIC2Q96RQ1 377 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 SPZ1Q9BXG8 430 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 ZMYND12Q9H0C1 365 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 MTRF1LQ9UGC7 380 aaKnown RBP7.47□□□□□ -1.21
RTN4-203ENST00000357376 ATP6V0A2Q9Y487 856 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 LMTK3Q96Q04 1460 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 KIF4AO95239 1232 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 GDF11O95390 407 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 KLRC1P26715 233 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 PSMD2Q13200 908 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 RCSD1Q6JBY9 416 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms