RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 PPP1R16BQ96T49 567 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 TMEM60Q9H2L4 133 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 CAPN11Q9UMQ6 739 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 ANO9A1A5B4 782 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 LAD1O00515 517 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 CFLARO15519 480 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 PER1O15534 1290 aaPredicted RBP12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 MSH2P43246 934 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 OCA2Q04671 838 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 LLGL1Q15334 1064 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 SPOPLQ6IQ16 392 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 DARS2Q6PI48 645 aaKnown RBP12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 C7orf31Q8N865 590 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 SNX19Q92543 992 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 DHTKD1Q96HY7 919 aaPredicted RBP12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 FMO2Q99518 471 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 CXorf56Q9H5V9 222 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 DIS3Q9Y2L1 958 aaKnown RBP12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 ABCC2Q92887 1545 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 ZAP70P43403 619 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 EPHB1P54762 984 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 EHHADHQ08426 723 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 NSUN2Q08J23 767 aaKnown RBP eCLIP12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 TRIM67Q6ZTA4 783 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 EEF2KMTQ96G04 330 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 COPB1P53618 953 aaKnown RBP12.4□□□□□ -0.43
SPTBN1-202ENST00000356805 PTK2Q05397 1052 aa12.4□□□□□ -0.43
SPTBN1-202ENST00000356805 ADAM9Q13443 819 aa12.4□□□□□ -0.43
SPTBN1-202ENST00000356805 MAML1Q92585 1016 aa12.4□□□□□ -0.43
SPTBN1-202ENST00000356805 TTI1O43156 1089 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 TRAPPC10P48553 1259 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 TNFAIP1Q13829 316 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 CLEC17AQ6ZS10 378 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 FAM149B1Q96BN6 582 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 EPB41L5Q9HCM4 733 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 FLOT2Q14254 428 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 SLC30A9Q6PML9 568 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 ZSCAN10Q96SZ4 725 aaPredicted RBP12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 TLK1Q9UKI8 766 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 PCDHA7Q9UN72 937 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 ESRRBO95718 433 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 KCNA1Q09470 495 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 FAM133BQ5BKY9 247 aaKnown RBP12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 PARP9Q8IXQ6 854 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 RBM46Q8TBY0 533 aaKnown RBP12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 ATP8A2Q9NTI2 1148 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 MID2Q9UJV3 735 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 TMEM247A6NEH6 219 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 E7EWF7 191 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 SPAG7O75391 227 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 MAPK4P31152 587 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 DAB2P98082 770 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 DOK7Q18PE1 504 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 ATG16L1Q676U5 607 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 BLIDQ8IZY5 108 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 MRFAP1Q9Y605 127 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 FANCAO15360 1455 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 H0YCG3 227 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 LRRN2O75325 713 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 GOLGA8HP0CJ92 632 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 OCRLQ01968 901 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 MKRN3Q13064 507 aaKnown RBP12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 CYP4F22Q6NT55 531 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 NCLNQ969V3 563 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 USP28Q96RU2 1077 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 C19orf44Q9H6X5 657 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 ARPP21Q9UBL0 812 aaPredicted RBP12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 TRAPPC8Q9Y2L5 1435 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 CYP4A11Q02928 519 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 KLC3Q6P597 504 aa12.39□□□□□ -0.43
SPTBN1-202ENST00000356805 TARSL2A2RTX5 802 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 HNRNPDLO14979 420 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 RPN1P04843 607 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 LONP1P36776 959 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 PABPC4Q13310 644 aaKnown RBP eCLIP12.38□□□□□ -0.434e-10■□□□□ 10.4
SPTBN1-202ENST00000356805 ZNF790Q6PG37 636 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 FBXO11Q86XK2 927 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 PLA2G4DQ86XP0 818 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 SDR42E1Q8WUS8 393 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 GJA10Q969M2 543 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 MAGOHBQ96A72 148 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 TPCN1Q9ULQ1 816 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 POLIQ9UNA4 740 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 TRPM2O94759 1503 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 BASP1P80723 227 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 EXOC3L4Q17RC7 722 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 TEDDM1Q5T9Z0 273 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 ENOX1Q8TC92 643 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 KRT27Q7Z3Y8 459 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 TESK2Q96S53 571 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 BPIFA3Q9BQP9 254 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 COG4Q9H9E3 785 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 KLC4Q9NSK0 619 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 UBN2Q6ZU65 1347 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 APBA3O96018 575 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 ZSCAN20P17040 1043 aaPredicted RBP12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 ANXA13P27216 316 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 TFDP1Q14186 410 aa12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 CCDC85BQ15834 202 aaPredicted RBP12.38□□□□□ -0.43
SPTBN1-202ENST00000356805 ZC3H12BQ5HYM0 836 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms