RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 BLIDQ8IZY5 108 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 INTS9Q9NV88 658 aaKnown RBP18.6■□□□□ 0.57
COL27A1-201ENST00000356083 PLB1Q6P1J6 1458 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 TUBB2AQ13885 445 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 OR6B2Q6IFH4 312 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 TUBB2BQ9BVA1 445 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 SENP1Q9P0U3 644 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 METTL22Q9BUU2 404 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-201ENST00000356083 RPF1Q9H9Y2 349 aaKnown RBP18.6■□□□□ 0.57
COL27A1-201ENST00000356083 COL4A3BPQ9Y5P4 624 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 ZMYND10O75800 440 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 CCND2P30279 289 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 SLCO1A2P46721 670 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 AARS2Q5JTZ9 985 aaKnown RBP18.6■□□□□ 0.57
COL27A1-201ENST00000356083 NDFIP2Q9NV92 336 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 GEMIN8Q9NWZ8 242 aaKnown RBP18.6■□□□□ 0.57
COL27A1-201ENST00000356083 SCINQ9Y6U3 715 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 MRC2Q9UBG0 1479 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 LRRD1A4D1F6 860 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 ARHGAP18Q8N392 663 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 PPARAQ07869 468 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 C10orf76Q5T2E6 689 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 PNMA1Q8ND90 353 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 OR6B3Q8NGW1 331 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 ULK4Q96C45 1275 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 EDEM3Q9BZQ6 932 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 CASS4Q9NQ75 786 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 H0YCG3 227 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 ORC4O43929 436 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 TMCC1O94876 653 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 MAP2K2P36507 400 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 KHDRBS2Q5VWX1 349 aaKnown RBP18.59■□□□□ 0.57
COL27A1-201ENST00000356083 THEM5Q8N1Q8 247 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 TCP11Q8WWU5 503 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 DBNDD1Q9H9R9 158 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 THEGQ9P2T0 379 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 SCOCQ9UIL1 159 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 ARL13BQ3SXY8 428 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 FAM133BQ5BKY9 247 aaKnown RBP18.59■□□□□ 0.57
COL27A1-201ENST00000356083 ING2Q9H160 280 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 CHCHD3Q9NX63 227 aaKnown RBP18.59■□□□□ 0.57
COL27A1-201ENST00000356083 ADD3Q9UEY8 706 aaKnown RBP18.59■□□□□ 0.57
COL27A1-201ENST00000356083 MROH5Q6ZUA9 1318 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 ATP8A1Q9Y2Q0 1164 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 PDXDC2PQ6P474 469 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 TSC1Q92574 1164 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 GDAQ9Y2T3 454 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 CATSPER3Q86XQ3 398 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 TRIM42Q8IWZ5 723 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 OR8K1Q8NGG5 319 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 NAF1Q96HR8 494 aaKnown RBP18.59■□□□□ 0.57
COL27A1-201ENST00000356083 NT5C1BQ96P26 610 aa18.59■□□□□ 0.57
COL27A1-201ENST00000356083 SUN1O94901 812 aa18.58■□□□□ 0.57
COL27A1-201ENST00000356083 KRT1P04264 644 aa18.58■□□□□ 0.57
COL27A1-201ENST00000356083 CACNB1Q02641 598 aaPredicted RBP18.58■□□□□ 0.57
COL27A1-201ENST00000356083 LRRC74AQ0VAA2 488 aa18.58■□□□□ 0.57
COL27A1-201ENST00000356083 SUPT20HL1Q3ZLR7 823 aa18.58■□□□□ 0.57
COL27A1-201ENST00000356083 TPCN1Q9ULQ1 816 aa18.58■□□□□ 0.57
COL27A1-201ENST00000356083 PTPN23Q9H3S7 1636 aa18.58■□□□□ 0.57
COL27A1-201ENST00000356083 MED7O43513 233 aa18.58■□□□□ 0.57
COL27A1-201ENST00000356083 CACNB2Q08289 660 aaPredicted RBP18.58■□□□□ 0.57
COL27A1-201ENST00000356083 IFT88Q13099 833 aa18.58■□□□□ 0.57
COL27A1-201ENST00000356083 ASIC4Q96FT7 647 aa18.58■□□□□ 0.57
COL27A1-201ENST00000356083 RGL1Q9NZL6 768 aa18.58■□□□□ 0.57
COL27A1-201ENST00000356083 PAMP19021 973 aa18.58■□□□□ 0.57
COL27A1-201ENST00000356083 RPS8P62241 208 aaKnown RBP18.58■□□□□ 0.57
COL27A1-201ENST00000356083 RBBP7Q16576 425 aa18.58■□□□□ 0.57
COL27A1-201ENST00000356083 SLFN13Q68D06 897 aa18.58■□□□□ 0.57
COL27A1-201ENST00000356083 USP26Q9BXU7 913 aa18.58■□□□□ 0.57
COL27A1-201ENST00000356083 TRPC5Q9UL62 973 aaPredicted RBP18.58■□□□□ 0.57
COL27A1-201ENST00000356083 MFAP3P55082 362 aa18.58■□□□□ 0.56
COL27A1-201ENST00000356083 SNAP25P60880 206 aa18.58■□□□□ 0.56
COL27A1-201ENST00000356083 HDAC1Q13547 482 aaPredicted RBP18.58■□□□□ 0.56
COL27A1-201ENST00000356083 E2F5Q15329 346 aa18.58■□□□□ 0.56
COL27A1-201ENST00000356083 KRT40Q6A162 431 aa18.58■□□□□ 0.56
COL27A1-201ENST00000356083 TADA2BQ86TJ2 420 aa18.58■□□□□ 0.56
COL27A1-201ENST00000356083 FGFR1OP2Q9NVK5 253 aa18.58■□□□□ 0.56
COL27A1-201ENST00000356083 L3MBTL1Q9Y468 752 aa18.58■□□□□ 0.56
COL27A1-201ENST00000356083 GIPC2Q8TF65 315 aa18.58■□□□□ 0.56
COL27A1-201ENST00000356083 MAP3K7CLP57077 242 aa18.58■□□□□ 0.56
COL27A1-201ENST00000356083 POU5F1BQ06416 359 aa18.58■□□□□ 0.56
COL27A1-201ENST00000356083 ZNF394Q53GI3 561 aa18.58■□□□□ 0.56
COL27A1-201ENST00000356083 PHF21AQ96BD5 680 aa18.58■□□□□ 0.56
COL27A1-201ENST00000356083 CAPS2Q9BXY5 557 aa18.58■□□□□ 0.56
COL27A1-201ENST00000356083 SELENONQ9NZV5 590 aa18.58■□□□□ 0.56
COL27A1-201ENST00000356083 WARS2Q9UGM6 360 aaKnown RBP18.58■□□□□ 0.56
COL27A1-201ENST00000356083 ASMTLO95671 621 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 PATL1Q86TB9 770 aaKnown RBP18.57■□□□□ 0.56
COL27A1-201ENST00000356083 BCAS4Q8TDM0 211 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 SLC16A2P36021 539 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 DNAJC24Q6P3W2 148 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 ZBTB18Q99592 522 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 LLPHQ9BRT6 129 aaKnown RBP18.57■□□□□ 0.56
COL27A1-201ENST00000356083 UBE2TQ9NPD8 197 aaPredicted RBP18.57■□□□□ 0.56
COL27A1-201ENST00000356083 BTDP43251 543 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 GRAMD1BQ3KR37 738 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 PPP6R3Q5H9R7 873 aaPredicted RBP18.57■□□□□ 0.56
COL27A1-201ENST00000356083 TWF2Q6IBS0 349 aaKnown RBP18.57■□□□□ 0.56
COL27A1-201ENST00000356083 GTSE1Q9NYZ3 720 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms